Lactococcus lactis subsp. cremoris A76: llh_2420
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Entry
llh_2420 CDS
T01965
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
llr
Lactococcus lactis subsp. cremoris A76
Brite
KEGG Orthology (KO) [BR:
llr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llr03019
]
llh_2420
03009 Ribosome biogenesis [BR:
llr03009
]
llh_2420
Enzymes [BR:
llr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
llh_2420
Messenger RNA biogenesis [BR:
llr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
llh_2420
Ribosome biogenesis [BR:
llr03009
]
Prokaryotic type
rRNA helicases
llh_2420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEU39660
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All DBs
Position
463404..464744
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AA seq
446 aa
AA seq
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MKFTDFNFKDYINQTLENIKFEKPTEVQQKLIPIVLSGRDLVGESKTGSGKTHTFLLPIF
QNINPELDEVQAVITAPSRELATQIYKAAQEFVKVNGKIRVSNFVGGTDKARQIKKLEVA
QPHIVIGTPGRIHDLVKSNALVVHTARTFVVDEADMTLDMGFLADVDQIASSFGKRVQML
VFSATIPQKLQPFLKKYLHNPVMEKIANKTVISDTIENWLVSTKGSSHNQLLLQLTKALN
PYMAMIFANTKGRVDDIHHFLTSNGLKVAKIHGDVPPRERKRIMNSIKNLDYQYVVATDI
AARGIDIEGVSHIINDEIPKDLTFFVHRVGRSGRNGLRGTAITLYSPSDDSSIREIEKMG
VTFQPKAVKDGEIVDSYDRDRREKRTKKQDEISLATRGALAKGKKKVKPGYKRAIKWQIE
EENKKNRRAERNKNARKTRDSRKQSF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagactttaattttaaagattatatcaaccaaactttagagaatatcaaa
tttgaaaaacctactgaagtacaacaaaaattgattcctattgtcctttctggacgtgat
ttggtaggggaatctaaaacaggttctggtaaaacgcatacctttttattgccaattttc
cagaatattaatcctgaacttgatgaagtgcaagcagtcatcacggcaccttctcgcgaa
ttagcgacacaaatctacaaagctgctcaagaatttgtgaaagtaaatggcaaaattcgc
gtttcaaactttgtcggtggaacagataaagcccgccaaattaaaaaattagaagtagca
cagccacatatcgttattgggacaccaggtcggatccatgatttagttaagtctaatgcc
ttggttgttcatacagcaaggacatttgttgtcgatgaggcggatatgacacttgacatg
ggctttttggcagatgttgaccaaattgcttcaagctttggtaaacgtgtgcaaatgcta
gtcttttcagcaacaattcctcaaaaactgcaacctttcttgaaaaaatatttgcataat
ccagtcatggaaaaaattgcaaataaaacagtcatttcagataccattgaaaactggtta
gtttcaacaaaaggaagttcacataatcaacttttacttcaattgactaaagcactcaat
ccttatatggcaatgatttttgctaatacaaaaggacgtgttgatgatattcatcatttc
ttgacaagtaatggtcttaaagtggcaaaaattcatggtgacgtgccaccacgtgagcgt
aaacgtatcatgaattcaattaaaaatcttgattatcaatatgttgttgcgactgatatt
gcagcgcgtggaattgatatcgaaggagtttcacatattatcaatgatgaaattccaaaa
gacttgactttctttgttcaccgtgttggacgttctggacgtaatggattacgtggtaca
gcgattacactttacagcccttctgatgattcaagcattcgtgaaatcgaaaaaatgggt
gtaacttttcaacctaaggctgtcaaagatggcgaaattgtagattcttatgatcgtgac
cgtcgtgaaaaacggacgaaaaaacaagatgaaatttcacttgctactcgtggagccttg
gctaaaggaaagaaaaaagtcaaaccaggctataaacgtgctattaaatggcaaattgaa
gaagaaaacaaaaagaatcgtcgtgcagagcgcaataaaaatgcccgtaaaacacgtgat
tctcgtaagcaaagtttctaa
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