Lactococcus lactis subsp. cremoris A76: llh_3750
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Entry
llh_3750 CDS
T01965
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
llr
Lactococcus lactis subsp. cremoris A76
Pathway
llr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
llh_3750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llr03400
]
llh_3750
Enzymes [BR:
llr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
llh_3750
DNA repair and recombination proteins [BR:
llr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
llh_3750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
UvrD_C
HHH
5_3_exonuc
UvrD-helicase
Herpes_Helicase
IMS_HHH
AAA_12
nSTAND3
AAA_28
AAA_16
NPHP3_N
AAA_5
NTPase_1
MeaB
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AEU39926
LinkDB
All DBs
Position
703530..706031
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AA seq
833 aa
AA seq
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MTDKTYVTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGAIGDVVEGDSYTFY
GQLTQHPKYGEQLQVSQYEKAVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDS
ILEAPEKLDGLLTLARKNSFIKRLRENHGMEKMLTKLAEYGLPSKLTFQIYELYKEETIE
KIEENPYQLVEEVKGVGFKTADKIASELGIEADSPNRFRAALMHEVNTHSQATGDTYIEA
KNLLELTIDLLEEARNIEVNPAEVAAEINGLIVDGKVQQEGTKIFENSLFFAEDGIRKSL
TALTNRLGKDFADEKLLTVLEEVEKDLEITYDELQKQAIIGAMNQQFFILTGGPGTGKTT
IINGFIETYARLYQLDLDPDHYNDDVFPILLAAPTGRASRRMNELTGLPAATIHRHLGLG
QDEAEDALGNELSGSLLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPADFTVKKTDRSYFEVSANFV
PQTVEQIASAWQKRGNNPFELQILAPMYKGAAGINAMNILLQNLFNPLNDRLEFVLGDMK
FREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQDEIVMDFDGQELTYPRSEWYK
ITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTFLVERFKDDKPAAENLSVDSLTKKVTDKKEISNKEKNSGSVADLNLENFS
VRKKTAPKVEEISLFDEETESLGNGILTEALILSGNFDPLIGLTEQDFAIFNK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaaacttatgttacaggctcaattgaagctatttttttctctaatccaagc
aatttttataaagttttattaattgagattgatgaaacaaatgctgaatatgatgatttt
gaaattgtggtcaatggggcaattggcgatgtggtcgaaggggattcttatactttttat
gggcaattaacccagcatccaaagtatggggaacaattgcaagtcagtcaatatgaaaag
gctgtaccaacgtctggtgctggtttggtcaagtatttttcatcagataaatttccaggg
attggtaaaaaaacggcagagaaaattgttgaaacttttcctgaaaatacggtagattct
attttagaagcgcctgagaaattggatggtttattaactctagccagaaaaaattcattt
atcaaacgtttgcgtgaaaatcatggtatggaaaaaatgctgaccaagcttgcggagtat
ggcttgccaagtaaactcacttttcaaatttatgagttgtacaaagaggaaacgattgaa
aaaattgaggaaaatccttatcaacttgtggaagaagttaaaggggtgggctttaaaact
gccgataaaattgcgagtgaactagggattgaagcggatagtccaaatcgttttcgagcg
gctttgatgcatgaggtcaatacgcattcgcaagcaacgggtgacacttatattgaagct
aaaaacttgctggaattgacgattgatttacttgaagaagccagaaatattgaggtcaat
ccagctgaagttgctgcggaaataaatggtttaattgttgatggaaaagtacagcaagaa
ggaacgaaaatatttgaaaattccttgttttttgctgaagacggtatccgaaaatcactg
acagccttaactaatcgtttgggaaaagattttgctgacgaaaagttactgacagttttg
gaagaggtagaaaaagatttagagattacttatgatgaacttcagaaacaggccatcatt
ggagcgatgaatcagcaatttttcattttgactgggggaccaggaacggggaaaacaacg
attattaatggtttcattgaaacttatgcccgtctttatcagttagatttagaccctgac
cattataatgatgacgtttttcctattttattggcggcaccgactggtcgcgcttcaaga
cggatgaatgagttgactggacttccagcagcaacaattcatcggcacttaggcttaggg
caagatgaggcagaagatgcgcttggtaatgagttgtcaggttcacttttgattgtcgat
gaattttcaatggttgatacttggctagccaacaaactttttcaagccattcctggttca
atgaaagtccttctcgttggcgatgctgaccaacttccttctgtgggccctggacaaatt
tttgcagatttattaaaaattccagaaattccgtcagtaaaattggataagatttttcgt
cagggagatgattcaacgattaccgatttggctcatcatatcaaagatggacaattacct
gcagattttacggtgaaaaaaactgaccgttcttattttgaagtgagtgctaattttgta
ccacaaacggtggagcaaattgctagtgcttggcaaaaaagaggaaataatccttttgaa
ttacaaattttagcgcccatgtataaaggggccgctgggattaatgcaatgaatattctc
ttgcaaaatctctttaatccgcttaatgaccggcttgaatttgttttgggtgatatgaaa
tttcgtgaaggagataaagtattacatttagtcaatgacgctgaggccaatgtattcaat
ggagatttaggacaaattgttgaattgattgcagcaaaatatactgacagtaaacaagat
gagattgtgatggattttgatggtcaagaattgacctatcccagatctgaatggtataaa
attacgcttgcttatgccatgtctatccataaatcccaaggttcggaattttcaacggtc
atcgtcccgatggtctcttcttattcacggatgttagagcgaaatttactctatacagca
atcacgagggcaaagcaaagcttaattttattgggtgaagagcgtgcctttgctcaggct
gtggcgcgtgaaggagccaatcgaaaaacttttcttgttgagcgttttaaggatgataag
cctgcagctgaaaatctgtcagtagattccttaactaaaaaagttactgacaagaaggaa
atatctaacaaagagaaaaattctggatcagtagcagacttaaacttagaaaatttttct
gtcagaaaaaaaacagcaccaaaagttgaggaaatttcattatttgatgaagaaactgaa
agtttggggaatggaattctaacagaagcgctaattttatctggcaattttgatccctta
attggattgactgagcaagattttgcgatttttaataaatag
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