Lactococcus lactis subsp. lactis IO-1: lilo_0003
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Entry
lilo_0003 CDS
T02485
Symbol
rexB
Name
(GenBank) subunit B of ATP-dependent exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_0003 (rexB)
Enzymes [BR:
lls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lilo_0003 (rexB)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
lilo_0003 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Dna2
Motif
Other DBs
NCBI-ProteinID:
BAL50007
LinkDB
All DBs
Position
2773..6072
Genome browser
AA seq
1099 aa
AA seq
DB search
MEILYTEITQDLTEGLLEISLEELEKNRKVYYIVPSSMSFEKEKEILERLAKGSDAAVFD
LLVTRFKQLPYYFDKREKATTKTELGTAGLSMLFRRVLRSFSKEEIPLYFSLQDSAGFLE
MLIQLRTELLTANLSVENLPDSPKNQELKKILSRFEEKLANDYANYSEFGDFTSRLADGE
FDFQLKDVTIVIDGYTRFSAEEELFIESIQDRVARFVIGTYSDENSLTAGSETIYISTSQ
MIGRFRSKFPVELRKMASSSVNEVYNKLTKLLDLDSRFAISDQNIEINSADAKYFRIWEA
ENQKVEIEGVAKEIRQKISQGAFFKDFTVLVGDPAAYEITLKEIFELYEIPFFYAQEESM
SQHPLVIFFESLLSIKKNNYRTDDVVNLLKSKVYTDVNLDEEVIDYFEYYVQKYKISGRK
KFTEAFNESEFSKIELVNQLRENLLGNDSPLQVFLGTNRQKTGKKWVSDLQVLLETGNVM
ANMNTYFSEAESESKHQMADKHEQVWQMLISILNEFLAVFSDEKLKSLEFLDILLAGLKN
AKYRQIPANVDVVNIKDYELVEPKTNKYIYAIGLSQTNFPRIKKNSTLLSDEERLKINQT
TDENQFIEQLNVVNYQKNQFTVLSLVNSAKETLVLSMPQIMANEQGEFSPVFQLFLNHAD
EKILQKIQEVNLFESLEHIGNSRSVISMIGKIERELVETEEKNDDKRVFWSSIFRILVKS
NPDFQKILLDLAKDINTVNLSKETLDQIYGDKLYASVSSFERFYNCEYQYFLETTLGLET
FENIDINSKIVGNFFHEVFEKVMQEEALSAENFDEKLTKVLHDVDSNYSRYFTQDATARF
TWTNLEDIVRQTATVLKETVSTDELNTLLTESSFGLPKSELGNFSVDDIYLRGRIDRLDQ
LSSDYLGAIDYKSSAHSFKLQDAYDGLSLQFMTYLDVIKEAFPNQKIWGALYLQFKNQPI
NLSEINHLSEIAGLLKESMRYDGLVLEEAADQIKAIENITVKKSNIYNQEEFEQLLKLNE
NHYQHAGQRLKSGQIAINPIMKRSEGIDQTGNVRGCRYCPLKSICRFEANVHMNDHSREI
GQKSQAEILAELKGEGRNE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttatatactgaaattacacaagatttaacagagggactattagagatttct
cttgaagaacttgaaaaaaatcgaaaagtttattacattgtgccttcttcaatgtcattt
gagaaggagaaagaaattttagagcgcttggctaagggaagtgatgcagcagtttttgac
ttactcgtcactcgttttaagcaattgccctattattttgataagcgggaaaaagcgaca
acaaagacagagttgggcacagcaggcctttcaatgctttttcgacgtgttttgaggagt
ttttcgaaagaagaaattccgctgtatttttctctacaggattctgctggttttttggaa
atgctaattcagttaagaacagagttactgacagcaaatctgtcagtagaaaatttacct
gacagccctaaaaatcaagaattaaaaaagattttaagtagatttgaagaaaaattagca
aatgactatgctaactactcagaatttggtgattttactagtcgtcttgctgatggggaa
tttgattttcaactcaaagatgtgacaattgtcattgatggatatactcgattttctgcg
gaagaagagctttttattgaaagtattcaagatagagtggcacgttttgtcattggaact
tatagtgatgaaaattcactgacagccggatctgaaacaatttatatcagtacgagtcaa
atgattgggcgttttcgcagtaaatttccagtagaactaagaaaaatggcttcttcatct
gtcaatgaagtttacaataagttgacaaaattactcgatttagattcaagatttgccatt
tctgatcaaaatattgaaataaattctgctgatgcaaaatatttcagaatttgggaagcc
gaaaatcaaaaagttgaaattgaaggtgtcgcaaaggaaattagacaaaaaataagtcag
ggggcttttttcaaagattttacagttttagtaggcgatccagctgcttatgaaattact
ttgaaagaaatttttgaactttatgaaattccatttttctatgcccaagaagaatcaatg
agtcagcatcctttggttatcttttttgaaagtttactttcaattaaaaagaataattat
cggacagatgatgttgtcaatcttctaaaaagcaaggtttacactgatgtcaaccttgat
gaagaagtcattgattactttgaatactatgttcaaaaatataagatttctggtcgaaaa
aaatttacggaagcattcaatgaaagtgagttttctaaaattgaattagtgaatcagctt
cgcgaaaatttattgggaaatgattctcctttacaagtctttttggggacaaatcggcaa
aaaacaggaaaaaaatgggtttctgatttacaagttttacttgaaactggaaatgtaatg
gccaatatgaacacttatttttcagaagcagaatctgaaagtaagcatcaaatggctgat
aaacatgaacaagtttggcaaatgcttatttcgatattgaatgagtttttggccgttttt
tctgatgaaaaattgaaaagtctggagtttttagatattttattagcaggattgaaaaat
gcaaaatatcgacaaattccagcaaacgttgatgttgtaaatatcaaagattatgaactt
gttgaacctaaaactaataaatatatctatgccattggtttgagtcaaactaattttcca
agaataaagaaaaattcaacacttttatccgatgaagaacgactaaaaattaatcaaaca
actgatgaaaatcagtttattgaacagttgaacgttgtcaactatcaaaaaaatcagttt
acagtcctttctttagtgaattcggcaaaagaaactttagttttgtccatgccacaaatt
atggcaaatgagcaaggagaattttcaccagttttccaattatttttgaatcatgcggat
gaaaaaattcttcaaaaaattcaagaagtcaatctttttgaaagcttagagcacattgga
aacagtcgttcagtgatttctatgattggaaaaattgagcgtgaacttgttgaaactgaa
gaaaaaaatgatgacaaaagagttttttggtctagtattttccgaatcttagttaagtca
aatcctgattttcaaaaaatattattggatttagctaaagatattaatacggtcaattta
tcaaaagaaaccttagaccaaatttatggtgataaactgtatgcttctgtcagttctttt
gaacgcttttataactgtgaatatcagtactttttagagaccactttgggtctggaaact
tttgaaaatattgatataaattccaaaattgtcggtaactttttccatgaagtttttgaa
aaagtcatgcaagaagaagctttgtcagctgaaaattttgatgaaaaattgacaaaagtt
ttacatgatgttgacagtaattactctcgttattttactcaggatgcaacagcaagattt
acttggaccaatttagaagacattgttagacagactgcaacagttttaaaggaaacagtt
tctactgatgaacttaatactttactgacagaaagtagttttggcttaccaaaaagtgaa
ttaggtaatttttctgttgatgatatttacttacgaggaagaattgaccgtttggaccaa
ctttcttctgattatttaggagctatagattacaaatcaagtgctcattcctttaaatta
caggatgcttatgacggtctgagtttacaatttatgacctatttagacgtgattaaagaa
gcttttcctaatcaaaaaatatggggtgctctttatttacaatttaaaaatcaaccaatt
aacttatcagaaatcaatcatttatcagagattgctggcttattgaaagaatcaatgcgc
tatgatggtttagttttggaagaggcagctgaccaaataaaagcaatagaaaatattact
gtaaaaaaatctaatatttacaatcaagaagaatttgaacagcttttaaaattgaatgaa
aatcattatcagcatgctggtcagcgacttaagagtggtcagattgcaataaatccaatt
atgaaacgctccgaagggattgatcaaacaggtaatgttcgaggttgtcgctactgtccg
cttaaatctatttgtcgatttgaagcaaatgtacacatgaatgatcacagtcgtgaaatt
ggtcaaaaatctcaagcagaaatcttagcagaattaaaaggagaagggcgaaatgagtga
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