Lactococcus lactis subsp. lactis IO-1: lilo_0401
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Entry
lilo_0401 CDS
T02485
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lls03016
]
lilo_0401 (truA)
Enzymes [BR:
lls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
lilo_0401 (truA)
Transfer RNA biogenesis [BR:
lls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lilo_0401 (truA)
Prokaryotic type
lilo_0401 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Glyco_transf_61
Plasmid_RAQPRD
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAL50402
LinkDB
All DBs
Position
432400..433161
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AA seq
253 aa
AA seq
DB search
MTRYKATIAYDGTDFAGFQSQTNQRTVQEEIEKVLTKLNSFEPVILQGSGRTDSGVHAFG
QVIHFDLKGKVRDLERLRFGLDTQTPADIAVKKVELVPDDWHARYQKHEKTYEYYLENSI
TRSPFQRHSKAYFRYPLNFERMQEAMSKLVGEHDFTGFTASGSSVDDKVRTIYQAEIIRL
DEENFKFIFRGNGFLYKQVRNMVGTVIKIGNDRMPVSQIDKILTSKNRDFAGPTAAPEGL
YLKEVKYAENTDI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatacaaagccacaatagcctatgatggcacagattttgcaggttttcaaagc
caaacaaatcaaagaaccgttcaagaagaaattgaaaaagtactgacgaagttaaattct
tttgagccagttattttacaaggatcaggccgaacagattctggagttcatgcttttggt
caagtcattcattttgatttaaagggtaaagttcgtgatttggaacgtctgcgatttggt
ttagacactcaaaccccagcagatattgcagtaaaaaaagtggaacttgtcccagatgat
tggcatgcaagatatcaaaagcatgaaaaaacctatgagtattatctagaaaattcaatt
acacggagtccatttcaaagacattctaaagcctattttcgctatccacttaattttgag
cggatgcaagaagcaatgtcaaagttggttggagaacatgattttacaggttttacagca
tcgggttcatcagttgatgacaaagtaagaacgatttatcaggcagaaattatccgtctt
gacgaagaaaatttcaaatttatttttcgtggcaatggctttttgtataaacaagtgcga
aacatggttggaacagtcattaaaattggtaatgaccgaatgcctgtcagccaaatagat
aaaatattgacctctaaaaatagagattttgcaggaccaacagcagcacctgaaggttta
tatttgaaagaagtcaaatatgcggaaaatactgacatctaa
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