Lactococcus lactis subsp. lactis IO-1: lilo_0412
Help
Entry
lilo_0412 CDS
T02485
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain 2
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Pathway
lls03030
DNA replication
lls03430
Mismatch repair
lls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lilo_0412 (dnaE)
03430 Mismatch repair
lilo_0412 (dnaE)
03440 Homologous recombination
lilo_0412 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lls03032
]
lilo_0412 (dnaE)
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_0412 (dnaE)
Enzymes [BR:
lls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lilo_0412 (dnaE)
DNA replication proteins [BR:
lls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lilo_0412 (dnaE)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lilo_0412 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF4351
Motif
Other DBs
NCBI-ProteinID:
BAL50413
LinkDB
All DBs
Position
442776..445958
Genome browser
AA seq
1060 aa
AA seq
DB search
MFAPLNTKTEYSFLDSVVKVDDYLETAHRLGYQTVGICDVGNLHAAFRFVRKAQKFNLQP
IISIELNFEWRGLPIAFSFIAKDTEGYKNILRISTLHNYGRRQFSDIQNHLSGIALIIPE
TYGSLSELTELSSVADEAFIGIDQLTDKGAKFNLPTLPFPAIRYLNFADNEILAILHAVR
DGISFDESLTISSNELLQRPEAYETYFQKYFPQALKNLSALTAKIAYQFDEKLELPRFDK
KRQAVEHLREEATLGLSARLEEKNLLTEVSSVNLQDLSVYQERLEKELSVIHQMGFDDYF
LIVADLLRYAREQEIYCGMGRGSAAGSLVAYVLGITQVDPVQHNLFFERFLNPERVAMPD
IDIDMPDDRRAELLAYMKNRYGSDHVAQIVTFSTLGKRQALRDVGKAFGMTEAELSNLTR
MLVRRFGTLADEYENNQRFKAEVLKNGKLKRIYEVARRIEGMPRQTSTHASGVVLSEESL
VNYVSLKPSEDLALTQYEAPDVEAIGLLKIDFLGLRNLTIISRLRDLVKRRQKIDVDPLK
INLEDEDTLALFRAGNTMGIFQFENPQMRRFLRNLAPSKFDDIVDATSIFRPGPSQFIPQ
FVARRHGKEIVPTVDDSISEILKPTYGIMIYQEQIMQVAQAFAGFSLGKADLLRRAISKK
KGSELEKLREDFLDSASHNGHSKEKAEEIYDLIERFANYGFNRSHGFAYGALAFQIAYFK
AHFPDEFYEIQLRDRKREVMILDALENGFEIEKPSINLMKIGDFVKNKKIRLGLAHVQGI
SRDLAKWIVENQPYKDLADFIEKLPNNFHKKENILPLIQIGAFDYADSNRGKLAYNLADH
ANLLNYYSDDIFMASSGGGFAYHEAEDYSETEKYDFEKNLLGIGVTPHPLQNLARRFEGN
FTPLAQLVKNRRMTILVEINYIRTHRTKTGQTMAFLTVSDSRENFDVTLFPEIYRQFSSE
LEQEKFCLISGKVTERNDELQLVADRISPALETDRKLWLNLRDEKYNQKISQILREFPGS
HQVILHYSNLKKTIQTKIYVEESEILQKRLEGYVIAGIYK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacccttgaatacaaaaactgaatatagttttttagatagtgtcgttaaagtt
gatgactatttggaaacggcgcaccgtttaggttatcaaacggttggaatttgcgatgtt
gggaatcttcatgctgcttttcgttttgtcagaaaagctcaaaaatttaatttgcaaccc
attattagtattgagctaaattttgaatggcggggtttaccaattgctttttcttttatt
gctaaagatactgaaggttataaaaacatacttcggatttcgacgcttcataactatgga
cgccgtcaattttctgatattcaaaatcatttatcaggaatcgccttgattattcctgaa
acttacggaagtttgagcgagctgacagaactttcgtcagtagctgatgaagcttttatt
gggattgatcaactgacagataaaggggctaaatttaatttaccaacacttccttttcct
gctattcgctatttgaattttgctgataatgaaattttagcaattttgcatgcggtgcgt
gatggaatttcttttgatgaaagtttaacaatcagttctaatgaacttcttcaaagacca
gaagcttatgagacttacttccagaaatattttccacaggctttgaaaaatctatcagca
ttaacagcaaagattgcttatcagttcgatgaaaaattggagcttcctagattcgataag
aagagacaggcagttgaacatttacgagaagaagcgactttaggtttgtcagctcgactt
gaagaaaaaaatttactgacagaagtctcgtcagtaaatttgcaagatttgtcagtttat
caagaacgtttagaaaaagagttgtcagtcattcatcaaatgggatttgatgactatttc
ttgattgtcgcggatttgttgcgttatgcccgtgaacaagaaatttattgtggaatgggg
cgtggttcagcggccggttctttagttgcctatgttttaggaattacacaagttgaccct
gttcaacataatcttttcttcgaacgttttttgaatccagaacgtgtcgccatgcccgat
attgatattgacatgccagatgaccgtcgtgctgaattattggcctatatgaaaaacaga
tatggttcagaccatgtcgcacaaattgttactttttcaaccttgggtaaaagacaggcg
cttagagatgttggtaaagcttttggaatgactgaagctgaattatccaatttgactcgg
atgcttgtgcgtcgttttggaactttggctgatgagtatgaaaataatcaacgttttaaa
gctgaagtgttaaaaaatggaaaattgaaaagaatttatgaagtcgcaagacgaattgag
ggaatgccccgtcagacttcaacacacgcttcaggtgtcgttctttctgaagaatctttg
gtgaattatgtatcattaaaaccgtcagaagatttggctttgacgcaatatgaggcgcca
gatgttgaagcaattggacttttgaaaattgactttttgggattacgtaatttaacaata
atttctagattacgtgatttggtgaaaagacgtcaaaaaattgatgttgatccactaaaa
ataaatttggaagatgaagacacattggccctttttcgggctggaaataccatgggaatt
tttcagtttgaaaatccacaaatgcgacgttttttaagaaatcttgctccaagtaaattt
gatgatattgttgatgcaacttcaattttccgtcctggtccatcacagtttattccacaa
tttgttgctcgacgacatgggaaagaaattgtgcctaccgtggatgattctattagtgaa
atcttaaagccgacatacggaattatgatttaccaggagcaaattatgcaggttgctcaa
gcttttgctggcttttctcttgggaaagctgaccttcttagacgagcaatttctaagaaa
aaagggtctgagttagaaaagttgcgtgaagatttcttagattcagcaagccataatggc
cattctaaagaaaaagcagaagaaatctatgacttaattgaacgttttgctaattatggt
tttaaccgttcacacggttttgcttatggggcacttgcttttcaaattgcttattttaag
gcacactttcctgatgaattttatgaaattcaattacgtgatcgcaaacgtgaagtaatg
attttagatgcgttagaaaatgggtttgaaatagaaaaaccaagcattaatctgatgaaa
attggcgattttgtaaaaaataaaaagattcgtttaggattggctcacgttcaaggaatt
tctcgtgatttagcaaaatggattgttgaaaatcaaccctataaagatttagcagacttt
atcgaaaaattacctaataattttcataaaaaagaaaacattctcccattgattcagatt
ggagcctttgattatgcagattcaaatcgagggaaattagcttataatttggctgaccat
gctaatttattaaactattatagtgatgatatttttatggcaagttctggtgggggcttt
gcctatcatgaggcagaagattattcagaaaccgaaaaatacgattttgaaaaaaattta
ttaggaattggggtaacaccacatcctttgcaaaatctagctcgcagatttgaaggtaat
tttacacctcttgctcaacttgtgaaaaatagacgaatgactatcttggttgaaatcaac
tacattagaacgcatcggactaagacggggcaaacaatggcctttttaacagtatctgat
agtcgtgaaaattttgatgtgacactttttccagagatttatcgtcaattttcaagtgag
cttgaacaagaaaaattttgcctcatcagtggaaaagtaacagaacgtaatgatgaatta
cagctggttgctgaccgaataagtccagctttagaaacggatagaaaactttggctaaat
ttaagagatgagaagtataatcaaaaaatttcacaaattttgcgtgaatttccgggctct
catcaagtgattcttcactattcaaatttaaaaaaaacaatccaaacaaaaatttatgtg
gaagaatcggagattttacaaaaaaggcttgaggggtatgttatagctggtatttataaa
taa
DBGET
integrated database retrieval system
