Lactococcus lactis subsp. lactis IO-1: lilo_0516
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Entry
lilo_0516 CDS
T02485
Symbol
ygbG
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lls03016
]
lilo_0516 (ygbG)
Enzymes [BR:
lls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
lilo_0516 (ygbG)
Transfer RNA biogenesis [BR:
lls03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
lilo_0516 (ygbG)
Prokaryotic type
lilo_0516 (ygbG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NAGPA
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAL50517
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All DBs
Position
549317..550240
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AA seq
307 aa
AA seq
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MEIQFLGTGAGQPSKSRNTQAIALKMLDERNEIWLFDCGEATQHQILNTTIKPRKITKIF
ITHLHGDHIFGLPGFLSSRSFQSSDEQTDLELYGPVGIKDFVLTALRISGSRLAYRINFH
EIDSAGKIFEDDSFEVHTDLLDHTIFCLGYRVVEKNRIGELDANALKEAGLPFGPLFGKI
KKGEIVQYEGKTFDPKDYIGADKAGKIVTILGDTRKSNVAVRLAYGADLLVHEATYEANE
SKMARAHGHSTTKQAADVAKEAGVNRLLLTHISARYVGPLVGQLVREAQTVHSNTFVVKD
FYEEKIG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaatttttagggactggggctggtcagccttctaaatcaagaaacactcag
gcaattgctttgaaaatgcttgatgagcgtaatgaaatttggctttttgactgtggtgaa
gcaacgcaacatcaaattttaaatacgacaattaagccacgaaaaattactaagattttt
attacacatttacatggggatcatatttttggcttgcctggttttttgtctagtagaagt
tttcaaagttcagatgaacaaactgatttggagctttatggccctgtgggaattaaagat
tttgttttgaccgctcttagaatctcgggttcacgcttagcttatcgtatcaattttcat
gaaattgattcggctggaaaaatctttgaagatgatagttttgaagtccatacagatttg
cttgaccatactattttctgcttgggttatcgcgtcgtagaaaaaaatcgaataggtgaa
ctcgatgccaatgctttaaaagaagctgggcttcctttcggacccctttttggtaaaata
aaaaaaggtgagattgttcagtacgaaggaaaaactttcgatcctaaagattatatcgga
gcggataaagctggtaaaatagtcacgattttaggcgatacaagaaaatcgaatgttgca
gtacgcttggcttatggagcagacttattggttcatgaggcaacttatgaagcaaatgaa
agtaaaatggcaagagcacatggtcattcaacgacgaagcaagcagcagacgtcgccaaa
gaagccggagttaatcgattgttattgactcatattagtgcacgctatgttggacctttg
gttggacaattggtgcgtgaggcacaaactgttcattccaacacttttgtggttaaggat
ttttacgaggaaaaaattggttag
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