Lactococcus lactis subsp. lactis IO-1: lilo_0520
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Entry
lilo_0520 CDS
T02485
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta chain
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Pathway
lls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
lilo_0520 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lls03021
]
lilo_0520 (rpoE)
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_0520 (rpoE)
Transcription machinery [BR:
lls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
lilo_0520 (rpoE)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
lilo_0520 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
BAL50521
LinkDB
All DBs
Position
554181..554744
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AA seq
187 aa
AA seq
DB search
MKITALEGQKISELSMIEVAHALLEQNGKEMQFSEIIRAIQDYLEKSDDEIKASISRFYT
EINTDGSFIPLGNNIWALRSWYAIDEIDEEVIALDEIEDEEEEKPAKKRKKVNAFGIEDE
IDPEDEEGAKETTEEDMSYDTQAEDEDKDDVAAYDAELAEVELDNVDEEVDIDVEDDEDD
SDDTDED
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattacagccttagaaggacaaaaaatctcagaactttcaatgattgaagttgct
catgctttattggagcaaaatggcaaagaaatgcaattctctgaaatcatcagagcgatt
caagattatttggaaaaatcagatgatgaaattaaagctagtatttctcgtttttataca
gaaatcaatacagacggaagtttcatcccattaggaaataatatctgggcacttcgttca
tggtacgccattgatgagattgacgaagaagttatcgctcttgatgaaattgaagacgaa
gaagaagaaaaaccagctaaaaaacgtaaaaaagtcaatgcttttggtatcgaagacgaa
atcgatccagaagatgaagaaggcgcaaaagaaacaactgaagaagacatgtcatacgat
actcaagcagaggacgaagataaagatgacgtcgctgcttatgacgcagaacttgcagaa
gttgaacttgataatgtagatgaagaagttgacatcgatgtagaagacgatgaagatgat
tcagacgatactgatgaagactaa
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