Lactococcus lactis subsp. lactis IO-1: lilo_0521
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Entry
lilo_0521 CDS
T02485
Symbol
ygcC
Name
(GenBank) hypothetical protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lls01011
]
lilo_0521 (ygcC)
Enzymes [BR:
lls01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
lilo_0521 (ygcC)
Peptidoglycan biosynthesis and degradation proteins [BR:
lls01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
lilo_0521 (ygcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
DUF6548
CD1107-like
ETRAMP
DUF6584
Orf78
Zip
Motif
Other DBs
NCBI-ProteinID:
BAL50522
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Position
554884..556533
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AA seq
549 aa
AA seq
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MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPSRSDSEEPERKIEPRKVD
LEPFKLPVFDFPAADENEEEPFVENENLPEEGDSLRQNLDGVVSEEIQNQNIPPQFSRSE
PKVQDEKIELEQFSEKKESEKMVKHQPSRRTNNPSKKTSSSKKNKNKNKNKKKKKVTAGK
IIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNATAKSINIPAGSSSKQIGEILQRQS
IIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLSTIASKLEEGGTEKPVAPTLGKILVPE
GYTLTQIAKAVTVNSGSNEKNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDS
GIKYQLEGYLFPATYDYTKSSTVESVIENMIQAANTQLTPYYDTIAQKNLTVNEVLSLAA
LVEKEANNDDDRRNVAGTFYNRMNAGMTLGSNLSILYAEGKLGEKTSLSEDANIDTNLDS
PYNLYTNTGFGPGPVDSPSLSSIKAVLDPAQNDYFYFVADVTTGKVYFAKTLAEQNANVQ
KYVNDKISS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaagaaacaactgaattttctcgaggaagttttaaagaaaaaatacttcgccaa
cttgaagaaaatgcagcgaaacaagcagaaactaagttcccagaccctgaagatttcgaa
cgtcccagcaggagcgactcagaagaacctgagcgaaaaatcgaaccaaggaaagttgat
cttgaacctttcaaacttcccgtctttgattttccagcagcggatgaaaacgaagaagaa
ccttttgtagaaaatgaaaaccttccagaagaaggcgattcattgcgtcaaaatttagat
ggagtggtttctgaggaaattcaaaaccaaaatattcctcctcaattttcaagaagtgaa
ccaaaagttcaagatgaaaaaattgaactagaacaattttcggaaaaaaaagaatcagaa
aaaatggttaaacatcaaccttcaagaagaaccaacaatccttctaaaaaaacttcttct
agcaagaaaaacaagaataagaacaaaaataagaaaaagaaaaaagtaacagcaggaaaa
atcattgctgtgattgttgttcttttagttttagttgttggaggaactggttggtatggc
tataactttgtaaaatctggcattcaacctctggattctaagaatgcaacagctaagtca
atcaatattcctgctggttcaagtagtaagcaaattggtgaaattttgcaaagacaatcc
attattaaaaatggaatggtttttcagtattatacaaaatttaaaaattattcagagttt
aaaagcggctattataatcttgcaccaaacatgagcttatctacgattgctagcaaactt
gaagaaggcggaacagaaaaacctgttgctccaactttaggtaaaattttagttcctgaa
ggctatacgctaacacaaattgctaaagctgtgacagttaatagtggaagcaatgaaaag
aatgcaaaaacgccattttctgaagcagacttcatgaaaaccgttcaagacccaaccttt
atcgctaaaatggttaaggcttatcctaaactgttcgcaagcttgccaacaaaagattca
ggaatcaagtatcagttagaaggttacttgttcccagcgacttatgattacacaaaatca
tcgacagttgaatcagtcattgaaaacatgattcaagcagccaatacccagctcactcct
tactatgatacaattgctcaaaagaatttgactgtcaatgaagttttgagtttagcagct
ttggttgaaaaagaagccaacaatgatgatgaccgacgcaacgttgctggaaccttctat
aatcgtatgaatgctggaatgactttgggttctaatctgtcaattctttatgccgaaggt
aaacttggtgaaaaaacaagtctttcagaggatgctaatattgataccaacctagattcg
ccatataatttgtacacaaatactggattcggccctggtcctgttgatagtccaagtttg
tcatctattaaagcagtacttgatcctgctcaaaatgactacttctactttgttgctgat
gtgacaacaggaaaagtttattttgcgaaaacattagctgaacaaaatgcaaatgttcaa
aaatatgtgaatgataagataagtagctaa
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