Lactococcus lactis subsp. lactis IO-1: lilo_0742
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Entry
lilo_0742 CDS
T02485
Symbol
smc
Name
(GenBank) chromosome segregation protein smc
KO
K03529
chromosome segregation protein
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lls03036
]
lilo_0742 (smc)
Chromosome and associated proteins [BR:
lls03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
lilo_0742 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Tropomyosin
ABC_tran
SbcC_Walker_B
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAL50743
LinkDB
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Position
789652..793176
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AA seq
1174 aa
AA seq
DB search
MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK
MPDVIFAGTEKRRALNYAEVIAHFDNSDHYLQGQDENEEVVITRRLYRNGDSEFLMNGRK
CRLRDIHDLFTDTGLGRDSLSIISQGRIESVFNSKPEERRAIFEEAAGVLKYKNRRNETE
SKLNSTQDNLDRLEDIIFELNSQLVPLQSQRDTALRFQELEAERSDLSLSVLVGQLESKK
AKYDQTELDLAQVAQELASLSTRKKVYDEQVIQLRTERQKVEAEQEKLQADQLNFSNLKS
DLTRKIELFDVQKDSSEKSAAEREERLENLKSRLEITQQNLAEVQNKSELLLTEKNDLDK
LLTELSADLATLSESPEVVMERLRDEFVQLVEEEARISNEIVRNKAEITDLSRRQSEQDE
SVRENLTKFEKISQDLSEAQENLNTVKKEIETLLAKFEEGNQAEKKQAKLERLAQNKMYD
YLQELNQHKARLTSLQNIRESHSNLFAGVRAVMQNASQIGGVIGVVSDLLTFDPKYTTAI
DIALGGGSQNVVTEDENAAKRAIAFLREKRLGRATFLPLTTIKGRDFNGLNRIQNMTGFV
DLAINLVSFESRLHKAMSSLLGTTVIVDSGENATAIARAMNYNVRIVTLDGTQINPGGSY
AGGAGKRNSTTFTSVEISNLEKQIKLSEEQLRISEKEVQKAQSARQELLKEIELLKTQGE
EKRFVEQSLNLKIEQLTEQKVALEQLTNLSANQEATGNLLELTKENEHNVEVLAKIIERK
AEIEKQLEEVKTNSQAHKALQSEKTSALNQAQLRQSEVVSELKFTKADEKRLLTDLSALT
EEKNQLTALLNPVRFDETERNNFSKQLTEVEERLSQINVRMVSLKFEREDLAAQMEDLEQ
HNQDFIQQTQELNTKKTRYEMQLEQIEGQLMTLQETLNSEHQISFEEAQATAKIVDDLAE
AEQKLKNLERQIKALGPINLDAIAQFDEVNERFTFLSSQKDDLLEAKNLLLSTIDDMNDE
VKIRFKTSFDAIRESFKTTFAQMFVGGLADLELTSDNLLEAGVEIKVQPPGKKLSSLNLM
SGGEKALTALALIFAILRVRTVPFVVLDEVEAALDEANVKRFGDYMNHFDNSNQFIVVTH
RRGTMAAAGSMYGVTMADAGVSKMISVKLDSAIN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaaaaaaatggaaattgtcggcttcaaatcttttgccgataagactaaagtt
gaatttgataaagggataaccgcagttgtcggtccaaatggttctgggaaatcaaatatt
gttgaagcattgcgctgggttttgggcgagcaatcggctaaagcacttcgtggtgggaaa
atgcccgatgttatttttgctggaactgaaaaaagacgtgctcttaattatgctgaggtt
attgctcattttgacaactctgatcattacctgcaaggacaagatgagaatgaagaagtt
gttattaccagacgtttatatcgaaatggcgattccgaatttttgatgaatggtcgtaaa
tgtcgtttgcgtgatattcatgatttatttacagatactgggcttggtcgtgactcttta
tcgattatttcccaaggacgaattgaatctgtttttaattctaaaccggaagaaagacgt
gccatttttgaagaagcagcaggtgttttaaaatacaaaaatcgacgaaatgaaactgaa
tcaaaattaaattcaacccaagataatcttgaccgtttagaagatatcatttttgaatta
aatagtcagctcgtgcccttacaatcgcaaagagatactgcactccgttttcaagaacta
gaagcagaacgttcagacttgtcactttctgtactggttggtcagttggaatctaaaaaa
gccaaatatgatcaaacagaacttgatttggcgcaagtggcacaggaattagcgagttta
tcaactcgtaaaaaagtttacgatgagcaagtcattcaattacgtacagaacgccaaaaa
gtagaagccgagcaagaaaaattgcaagctgaccaacttaatttttctaatctaaaatca
gatttaacaagaaaaattgaattatttgatgttcaaaaagattcatcagaaaaatcagct
gcggaacgcgaagaacgtttagaaaacttaaaaagtcgtttagaaatcactcaacaaaat
ttggcagaagttcaaaataaatcagaacttttactgacagaaaaaaatgacttagataaa
ttactgacagagctgtcagcagatttagcgaccttatctgaatcaccagaagtggtcatg
gaacggttacgtgatgaatttgttcaattagttgaagaagaagcccgaatctcaaatgaa
atcgttagaaataaagctgaaattacagatttgagccgtagacaatctgaacaggatgag
tctgtcagagaaaatttgactaaatttgaaaaaatcagtcaagatttatctgaagctcag
gaaaatttaaatactgttaaaaaagaaatcgagacccttttagcgaaatttgaagaagga
aatcaagcagagaaaaaacaggcaaaattagaacgtttagcccaaaataaaatgtatgat
tatctgcaagaacttaaccaacataaggcccgtttgacttccttgcaaaacatccgtgag
agtcatagtaatttatttgctggtgtccgtgccgtgatgcaaaatgcttcgcaaattggt
ggcgtgattggggttgtttctgatttattgaccttcgaccctaaatatacaacagccatt
gatattgctctaggtggcgggagccaaaatgtagtcacagaagacgaaaatgcggctaaa
agagcaattgcttttctacgtgaaaaaagattaggacgggcgacttttctaccgttgaca
acgattaaaggacgggactttaatggtttaaatcgtattcaaaatatgacaggatttgtt
gatttagcaatcaatcttgtaagctttgaaagtcgtttgcataaggcgatgagctcactt
ttaggaacaacggtgattgttgattctggagaaaatgcaactgctatcgctcgagcaatg
aattataatgttcggattgttacgcttgacggaacacagattaaccctggtggttcttat
gcaggaggagctgggaaacgtaactcaacaacttttacttctgttgaaataagtaattta
gaaaaacaaattaagttatcagaagagcagttaagaatttcagaaaaagaagttcaaaaa
gcccaaagtgctcgtcaagaattgctaaaagaaattgaacttttgaaaactcaaggggaa
gaaaaacgttttgttgaacaatctttgaatttgaaaattgaacaattaacagaacaaaaa
gttgcgctagaacaattaactaatctgtcagcaaatcaagaagcaacaggtaatttgctt
gaattaactaaagaaaatgaacataatgtagaagttcttgcaaaaattatagaacgaaaa
gctgaaattgaaaagcaacttgaagaagttaaaacgaatagtcaagcgcataaagccttg
caatcagagaaaacaagtgctttaaatcaggctcaacttcgtcaatcagaagtggtcagt
gaattgaaattcaccaaagcagatgaaaaacgtttactgacagacttgtcagccttgaca
gaagaaaaaaatcaactgacagcacttttaaaccctgtccgatttgatgaaacagaaaga
aataatttctcaaaacaactgacagaagtagaagaacgcttgagtcaaattaatgtccga
atggttagtttaaaatttgaacgtgaagatttagcagctcaaatggaagatttagaacag
cacaatcaagattttattcagcaaacacaagaacttaacacgaaaaaaacgcgttatgaa
atgcaattggaacaaatcgaaggacaattgatgacacttcaagaaacgttaaatagtgaa
catcaaatcagttttgaagaggcgcaagccactgcaaaaatagtggatgatttagcggag
gctgagcaaaaactcaaaaatctagaacgtcaaatcaaggcattaggaccaattaacttg
gatgccattgctcaatttgatgaagtcaatgaacgctttactttcctttcaagtcaaaaa
gatgatttattagaagctaaaaaccttctattgagtacaatcgatgacatgaatgatgaa
gttaaaattcggtttaaaacaagttttgatgcgattcgtgaaagtttcaaaacgaccttt
gctcaaatgtttgttggtgggcttgctgatttggaattaacaagcgacaaccttttagaa
gctggggttgaaattaaagtacaaccgccaggtaaaaaattatcaagtttaaatttgatg
agtggtggagaaaaagcgctgacagctttagctttaatttttgcaatcttaagagtacga
acagtacctttcgtggttcttgatgaggttgaagcggcacttgatgaagccaatgttaag
cgttttggtgattacatgaatcactttgataatagtaatcaatttattgttgtaacacac
cgtcgtggaactatggcggcagcaggttcaatgtatggtgttacaatggctgatgctggg
gtttctaagatgatttcagttaaacttgattcggctattaattga
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