Lactococcus lactis subsp. lactis IO-1: lilo_1022
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Entry
lilo_1022 CDS
T02485
Symbol
pcrA
Name
(GenBank) ATP-dependent helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Pathway
lls03420
Nucleotide excision repair
lls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lilo_1022 (pcrA)
03430 Mismatch repair
lilo_1022 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_1022 (pcrA)
Enzymes [BR:
lls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lilo_1022 (pcrA)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lilo_1022 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
lilo_1022 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
CdiI_ImmP
Motif
Other DBs
NCBI-ProteinID:
BAL51021
LinkDB
All DBs
Position
1092252..1094528
Genome browser
AA seq
758 aa
AA seq
DB search
MNPLLQGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAKEMRERALSLTPRAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGDQKSLM
KRILKEANLDPKKWEPKGLLNAISNAKNDLLDESAYEAQTSARHPYEMVVARVYKIYQKE
LRKAESMDFDDLIMQTLRLFDENPDVLSYYQGKFQYIHVDEYQDTNHAQYQLVKLLASRF
QNICVVGDADQSIYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILDAANNVIKNN
LKRRPKELWTQNDAGDKIVYFRAGNEQEEANKVSEIITSGVRSGRSYADYAVLYRTNAQS
RTIEDSFVKSNIPYTMVAGTKFYSRKEIRDVIAYLNVVANPADNMSFERIVNEPKRGVGP
GALEKLRRFADSRGLSLADSSFDIMLSDIRGKAAGEIYNLAMAFDLLRTHSESSTITELV
EEMLERTGYVKALQMMPSIENQARIENIEEFLSVTKGFDEKSEIPLDEETGEPIIETGLD
KLSRFLNEVSLLSETDAYEEESDQVTMMTLHAAKGLEFPIVFLIGMEENIFPLSRVNEDI
DELEEERRLAYVGITRAEETLYLMNANQRVLYGKTNYNRPSRFISEIDDELLEYAGIARK
ANSSFNASYKSGGFASGISMSDALHQRKAVINPTAAQATINNSETEDWQIGDTAIHRKWG
EGMVLGISGSGKNMELKINFPEVGMKRLLAAMAPIEKK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactattacaaggaatgaacgaaaaacaagcagaagcggtccaaactacagaa
gggcctttattgattatggcaggagctggttcgggtaagactcgtgtcttaactcatcga
attgcttacttaattgatgaaaaaatggttaatccttggaatattttagcgattaccttt
acaaataaagcagcaaaagaaatgcgggagcgtgctttatcacttactccaagagcacaa
gatacattaattgcgacctttcactcaatgtgtgtaagaattttgagacgtgatgctgac
catattggttataatcgtaattttacgattatagatccaggggaccaaaaatcgttgatg
aaacgaattttgaaagaagctaatttagatcctaaaaaatgggaacccaaagggctttta
aatgcgatttcaaatgctaaaaatgatttattagatgaatcagcttatgaagctcaaaca
agcgctagacatccatacgaaatggttgttgcgcgtgtttataagatttaccaaaaagaa
ttacgaaaagcagaatcaatggattttgacgatttaatcatgcagacgttgcgccttttt
gatgaaaacccggatgtcctttcttactatcaagggaaatttcaatatattcatgttgat
gagtatcaagataccaaccatgcacaatatcagttggttaaacttttagccagtcgtttt
caaaatatctgtgtcgttggggatgctgaccaatcaatctatggttggcgcggagcagat
atgcaaaatatcttagactttgaaaaagattatccaaaagctaaagttgttttgctcgaa
gaaaattaccgctcaacaaaaacaattcttgatgcggcaaacaatgttataaaaaataat
ttaaaacgtcgaccaaaagagctctggacgcaaaatgatgctggagataagattgtttat
tttcgtgctggaaatgaacaagaagaagcaaataaggtttctgaaattatcacatcaggt
gttcgttcaggacgttcttatgctgactatgctgtgctttatcggactaatgctcagtct
cggacaattgaagattcttttgttaaatctaatattccttatacaatggttgcgggaacg
aaattctactcacgtaaggaaattcgtgatgttattgcttatttaaacgtagtagcaaat
ccagcagataatatgagttttgaacgaattgttaatgaacctaaacgaggagtcggtccg
ggggcattagaaaaattacgtcgttttgctgacagtcgtggactttctttagcagattca
agttttgatattatgttatccgatattcgtggaaaagcggctggtgagatttataatttg
gcaatggcctttgatttgttgagaacacatagtgaaagttcaacaatcacagaattagtt
gaagaaatgttagagcgtactggctatgtcaaagctttgcaaatgatgccaagtatcgaa
aatcaagcacgaattgaaaatattgaagaattcttgtcagtaactaaaggatttgatgaa
aaatcagaaattcctctagatgaagaaacaggagagccaattattgaaactggtttagat
aagttgagccgtttccttaacgaagttagtttgctttctgaaacagatgcttatgaggaa
gaatctgaccaagtaacaatgatgaccctgcatgcggcaaaaggtttggaatttccaatt
gttttcttaattggaatggaagaaaacatttttcctttatcacgggtaaatgaagatatt
gatgagttagaagaagaacgacgtttggcttatgttggaattacacgggcagaagaaacg
ctctacttaatgaatgccaatcaacgtgtgctttatggtaaaacgaattataatcgtccc
agccgttttatttcggaaattgatgatgaattactagaatatgctgggattgctcgtaaa
gcaaattcaagctttaatgcttcttataaatctggtggttttgccagtgggatttcgatg
tcagatgcgcttcatcaaagaaaagcagtcattaatccaactgcagctcaagcgacgatt
aataattctgaaacagaagattggcaaattggcgatacagcgattcaccgtaaatggggc
gaaggtatggtattaggaatttctggttctggtaaaaatatggaactcaagattaatttc
ccagaagtcggaatgaaacgtttattagcagcaatggctccaattgagaaaaaatag
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