Lactococcus lactis subsp. lactis IO-1: lilo_1028
Help
Entry
lilo_1028 CDS
T02485
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lls03016
]
lilo_1028 (truB)
Enzymes [BR:
lls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
lilo_1028 (truB)
Transfer RNA biogenesis [BR:
lls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lilo_1028 (truB)
Prokaryotic type
lilo_1028 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NLBH
Big_3_3
Motif
Other DBs
NCBI-ProteinID:
BAL51027
LinkDB
All DBs
Position
1098847..1099836
Genome browser
AA seq
329 aa
AA seq
DB search
MNENLNGILNVYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPSVTGVLPVAVGKSTRLL
EYMEAAGKIYEGEVTIGFSTETEDADGEVVSKTPVERELTESEIDSVMKNFIGKIKQIPP
MYSAVKINGKKLYEYARAGQTVDRPAREITIKSFVRTSPVMTDETAGLVSFSFKVECSKG
TYVRTLAVDLAEQLGYAGHMSKLQRTASNGLMIKDAVKLSEIEAAKEAGVLSSLMYPAEY
AVSDLPRVILTADQFEMARVGKKFAEDDWVTDETTDSPVSKSNKSEFLLTDLSKLTRDKF
AAFYDDKLVAVYMKHPEKAGIWKPNKVLV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatttaaatggcattttaaatgtctataaagaagcgggctggacatctttt
gatgttgttgccaaacttcgtggtattttaaaaacaaaaaaaattggacatggtggaact
ttagacccttctgtgacaggcgttttaccagtggccgttggaaaatcgacgcggttatta
gaatacatggaggcggcaggtaaaatttacgaaggtgaagttacgattggtttttcaacg
gaaaccgaagatgctgatggggaagttgtcagtaaaacgccagtggaacgagagctgaca
gagtctgaaattgactcagtaatgaaaaattttattggaaaaataaagcaaattcctcca
atgtattcagccgtaaaaattaacggaaaaaaattgtatgaatatgccagagctggtcag
acagttgaccgtccggcaagagaaattacaatcaaatcatttgtcagaacaagtcccgtg
atgactgatgaaacggcaggtttggtaagtttttctttcaaagttgagtgcagtaaagga
acctatgtccgaacattagcagtagatttagcagagcaacttggttacgcaggacatatg
tcaaaattgcaaagaacagcaagcaatggactgatgattaaagatgccgtcaaactctca
gaaattgaggcagcaaaagaggcaggagtgctttctagcttaatgtacccagcagaatat
gctgtcagtgatttgccaagagtaattttgactgctgaccagtttgaaatggcacgagtt
ggaaaaaaatttgctgaggatgattgggttacagatgaaactactgacagccctgtcagt
aagtctaataaaagtgaatttttactgacagacttgtcaaaactgacaagagataaattt
gcagccttttatgatgataaattagttgctgtttacatgaaacatccagaaaaagcagga
atttggaaaccaaataaagtattggtttaa
DBGET
integrated database retrieval system
