Lactococcus lactis subsp. lactis IO-1: lilo_1070
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Entry
lilo_1070 CDS
T02485
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_1070 (sbcC)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lilo_1070 (sbcC)
Archaeal homologous recombinant proteins
lilo_1070 (sbcC)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
AAA_15
SMC_N
AAA_27
SAV0927-like
Motif
Other DBs
NCBI-ProteinID:
BAL51069
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Position
1141077..1143722
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AA seq
881 aa
AA seq
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MIRIEQVKINNFRNFDGEYKFDFSKDVTIFLGDNGNGKSSIFDAIQWCLTGSIERFNDIP
NLETLKNVLINKNTNDCFVEIKFTDNTILKRIISRKGKVLVRCLDANNNSIKSDKNVKQY
LEKAFKATSSSSFDVNNFMKSSLLAQDQVLDFIASDSANERYKVLSSILGMDDITSLKTN
YEQVKNILKIEIDKKYNLVTSRKEELKLQKSNIDNKYTNINIEDSNNFNIKDKQTEKDRL
LENKFQAERNLKEFNSQAKNIDKYIEDLNLISENISTLNSKNQELQNQQEKIMKVLVLNK
KDLKENDKFIQQVKIEEDLLSKNSAQEEELKNIESQLSNSDFNKLTSEPDKDVRNKMLHL
YHKTEEYKYALKYIDDFNELSKLGAQIPKDIQKLKQKIKQISDEIQTLKNQKGILQSEFL
SISSTEKLDPLIQLVQEASIFVKSHHEFENSCPVCKQTFPQSAKEFDNRLSHLLQESNVT
VEKLSNYRNKIQELEETISNKQKQSHIFQSDLSQRQKEEREVKDRISTITNDLLYLKVNF
NYEKNQLSILLNSSESRIKKREQYLELKMRKSNIERKLEEDSDIEFSGLNLKTLLEEKAK
LEKIQVKNLTLEEQLKLKIEKQNKDLAALKDFDKLLNVFSNHYKVKNYNDILKHLSYVID
EKDRKINSITREMNNYHLIIEYSTLKNDLEEKEKSIFEPQKSLEYLKTKLQLIDRELNRI
NNAYSFDQIINSNESTIQQYFNYLNPNVSSYRNLNLNIDDKANTLDIEIIGNNKSVKAVN
VLSSGQLNVLAISIFIAKNISQSNSLIDFIAIDDPIQNMDDINQFSMIDILSQLKKQVIF
TTHDAKYVNLFLKKNELRLDDISVYYLDSENNSYENILDNN
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgataagaatagaacaagtaaagattaataactttagaaattttgatggtgaatataaa
tttgatttttccaaagatgtcactatatttttgggggataatggtaacggaaaaagttct
atttttgatgctattcaatggtgtttgaccggtagcatcgaaagatttaatgatattcca
aatttagaaacactaaaaaatgtattaataaataaaaatactaatgattgttttgttgaa
ataaaatttactgataataccatattgaaaagaattatttcacgaaagggtaaagtactt
gttcgatgtctggatgcgaataataatagcataaaaagtgataaaaatgttaaacagtat
ttagaaaaagcgtttaaagctacatcaagtagtagttttgatgttaataattttatgaaa
tcatcactacttgcacaggatcaagtattagatttcattgcaagtgatagtgcaaatgaa
aggtataaggtattatcttcaattttaggaatggatgatatcactagtctaaagacaaat
tatgagcaagtaaaaaatatacttaaaattgaaattgataaaaaatataatcttgtgaca
tctcgcaaagaggagttgaaacttcaaaaatccaatattgacaataagtatacgaatatt
aatattgaagactctaataattttaatattaaagacaaacaaactgagaaggataggcta
ctagaaaataaatttcaagctgaaagaaacttaaaagagttcaattcacaagcaaagaat
attgataaatacattgaagatttaaatttaatttctgaaaatattagtactttaaactca
aaaaatcaagaacttcaaaatcaacaagaaaagattatgaaagttctcgttttaaataaa
aaagatttgaaagaaaatgataagtttattcaacaagtaaaaatagaagaagatctatta
tctaagaatagtgctcaagaagaagaattaaagaatatagaaagtcaattatctaattct
gattttaacaaattaacatctgaaccagataaagatgtaaggaataaaatgttacatctt
taccacaagactgaagagtataaatatgctttaaaatatattgatgactttaatgagcta
tcgaaattaggagcgcaaattccaaaagatattcaaaaacttaagcaaaaaattaaacag
attagcgatgagatacaaacgttgaaaaatcaaaaaggtattttgcagtcagaatttctt
tcaattagctcgacagaaaaacttgatccgttaattcaattagttcaagaagcgtcgata
tttgtgaaaagtcatcatgaatttgaaaattcctgccctgtatgtaaacagactttccca
caatctgctaaagagtttgataatcgtctttctcacttactgcaagaatccaatgttaca
gttgaaaaattgagtaactatagaaataaaatccaagaacttgaagaaaccatttcaaat
aagcaaaaacaatctcatattttccaatcagatttgtcacaaaggcaaaaagaagaaaga
gaagttaaggatagaattagtacaattacgaatgatcttctatatctaaaagttaatttt
aattatgaaaaaaatcaattgagtattttattgaatagttcggaaagtagaattaaaaaa
cgtgagcaatatttggaattgaaaatgagaaaatcaaatattgaaagaaagttggaagaa
gattctgatatagaattttcaggtttgaacctaaaaactttactagaagaaaaagctaaa
ctagaaaagatacaagtcaaaaatttaactcttgaagaacaattgaagttgaaaatagag
aagcaaaataaagatttagctgccttaaaagactttgataaattattaaatgttttttct
aatcattataaagttaaaaattataatgatattttaaaacatctttcatatgtaattgat
gaaaaagatagaaaaatcaattcaataactagagaaatgaacaattatcatcttattatt
gaatattctacgttaaagaatgatttagaagaaaaggaaaaatcaatttttgagccgcaa
aagtctttggaatatttaaaaactaaattgcagttaatagatagggaattgaaccgtata
aataatgcatatagttttgatcagataattaatagtaatgaatcaactattcaacagtat
ttcaactatctcaatccaaatgtatcaagttatagaaatttgaatttaaatatagatgat
aaggcaaacacattagatattgaaataattggcaataataaatctgtcaaagctgttaat
gtattaagttcagggcaactcaatgttttggccatttccatatttatagccaaaaacatt
agtcaaagtaattcgctaatagattttattgcaatagatgaccctattcaaaacatggat
gatatcaatcaattttcaatgattgatattctaagccagctgaagaaacaggttatcttt
acaacacatgatgcaaaatatgtaaatctttttttaaagaaaaatgaacttagattagat
gatatttctgtgtattatttggattctgaaaataacagctatgaaaatattttagacaat
aactag
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