Lactococcus lactis subsp. lactis IO-1: lilo_1120
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Entry
lilo_1120 CDS
T02485
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lls03032
]
lilo_1120 (topA)
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_1120 (topA)
Enzymes [BR:
lls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
lilo_1120 (topA)
DNA replication proteins [BR:
lls03032
]
Prokaryotic type
DNA Topoisomerases
lilo_1120 (topA)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lilo_1120 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
BAL51119
LinkDB
All DBs
Position
1205400..1207532
Genome browser
AA seq
710 aa
AA seq
DB search
MPTSTKSKTKKTTKKKTTRKRVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDL
KKSTMSVDIENDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHI
LNLPLEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKK
VKKGLSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHP
LKTNEDVIKVMERLDGPDFNVDKVEKKERRRNAPLPYTTSSMQQDAANKLNFRTRKTMMV
AQQLYEGLTLGSQGHQGLITYMRTDSTRISPVAQSAAHNYIADQFGEKYSKHGSKVKNAS
GAQDAHEAIRPSNVFNTPDAIAKYLDKDQLKLYTLIWNRFVASQMVAAIFDTVKVNLSQN
GVIFIANGSQVKFDGYLRIYNDSDKSNMLPEMEENETVKKANVKPEQHFTQPPARYSEAT
LIKTLEENGVGRPSTYAPTLETIQKRYYVRLSAKRFEPTELGEIVNKLIVEFFPNIVNTE
FTAEMEKDLDEVEEGKRQWIEVVDQFYKPFAKELENAEEGMEKIQIKDEPAGFDCDVCGS
PMVIKLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRIFYGCDRY
PECEFTSWDKPIGRDCPKSGHFLVEKKVRGGGKQVVCSNDECDYQEEKQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcaactaaaagtaaaacaaaaaaaactacaaagaaaaaaacaacacgaaaa
agagtcactccaggtaaaaatctggttattgtagaatcgccagcaaaagctaaaacaatt
gaaaaatatttaggtcgaaactacaaagttgtggcttcagtaggtcatattcgtgatttg
aaaaaatcaaccatgtctgttgatatagagaatgactatgaacctcaatatattaatatt
cgtgggaaagccccattaatcaactctctcaaaaaagaagcaaaggctgccaaagccgtc
tatctcgcaagtgacccggaccgtgaaggtgaagcaatttcttggcacttagcacatatc
ttaaatcttccacttgaagaaaaaaatcgagtggtctttaatgaaatcactaaagatgct
gttaaaaatgcctttaaggagccgcgtcaaattgatgtggatctagttgatgcccaacaa
gcacgccgagttcttgaccgtttggtgggttattcaattagtcctattctatggaaaaaa
gtcaaaaaaggactctcagcaggtcgagttcaatctattgccttaaaactaattgttgac
cgcgagaatgaaattaatgcttttattccagaagagtattggtcaattgatggtgaattt
aaaaaaggaactaaaaaattcaaagcatccttctggggaattgacggaaaaaaacatcct
ttaaaaaccaatgaagatgtcatcaaagtcatggaacgtttagatggtcctgattttaac
gtagataaagttgaaaaaaaagaacgtcgcagaaacgctcctcttccttatacaactagc
tcaatgcaacaagacgcggctaataaacttaactttcgtacccgtaaaacaatgatggtt
gctcaacaactttatgaaggtcttactttaggaagtcagggccatcaaggcttaattacc
tatatgcgtacagactcaacacgtatttctcctgtcgcacaaagtgcagctcacaattat
attgctgatcaatttggagaaaaatatagtaaacacggttcaaaagttaaaaatgcctct
ggagcccaagatgcccacgaagcaattcgaccttcaaatgtctttaacactccagacgcc
attgctaaatatctagacaaagatcaattaaaactttacacactcatctggaaccgtttc
gtagccagtcaaatggtcgcagctatttttgatactgttaaagtaaatctgtctcaaaat
ggtgttatctttattgcgaatggttcacaagtgaaatttgacggttatctgcgaatctac
aatgattctgataaatcaaatatgctcccagagatggaagaaaatgaaactgtcaaaaaa
gcgaatgttaaaccagaacaacatttcactcaaccaccagctagatattccgaagcaaca
ctcatcaagacattggaagaaaatggagtgggacgtccctcaacttatgcgcctacacta
gaaacaattcaaaaacgttattatgtgagattatcagcaaaacgttttgagcctacagag
cttggagaaattgtcaataagcttattgttgagttcttccctaacattgtaaatactgaa
tttacagctgaaatggaaaaagatcttgatgaagttgaagagggaaaacgtcaatggatt
gaggttgttgaccaattttacaaaccctttgcaaaagaacttgaaaatgccgaagaaggt
atggaaaaaatccaaatcaaggatgaacctgctggctttgactgtgatgtttgtggaagt
ccgatggtaattaagttgggacgtttcggaaaattttatgcttgtagcaacttcccagat
tgccgaaatactaaggcaattgtcaaagaaatcggcgtaaaatgtccgctttgtcatgaa
ggaaatattatcgaacgcaaaacaaagaaaaatagaattttctatggttgtgatcgttac
ccagaatgtgaattcacaagttgggacaaacctatcggacgtgattgtcctaaatctgga
cattttcttgttgaaaagaaagttcgtggtggcggtaaacaagtggtatgttcaaatgat
gaatgtgattatcaagaagaaaaacaaaaataa
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