Lactococcus lactis subsp. lactis IO-1: lilo_2122
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Entry
lilo_2122 CDS
T02485
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Pathway
lls03030
DNA replication
lls03410
Base excision repair
lls03420
Nucleotide excision repair
lls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lilo_2122 (polA)
03410 Base excision repair
lilo_2122 (polA)
03420 Nucleotide excision repair
lilo_2122 (polA)
03440 Homologous recombination
lilo_2122 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lls03032
]
lilo_2122 (polA)
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_2122 (polA)
Enzymes [BR:
lls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lilo_2122 (polA)
DNA replication proteins [BR:
lls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
lilo_2122 (polA)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
lilo_2122 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lilo_2122 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DUF2120
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAL52118
LinkDB
All DBs
Position
complement(2277101..2279755)
Genome browser
AA seq
884 aa
AA seq
DB search
MEEIGNKMENKDRLLLIDGSSVAFRAFFALYNQIDRFKAPNGLHTNAIFAFHTMLSSLME
RIEPTHVLIAFDAGKTTFRTEMFADYKGGRSKTPDEFREQLPFIKEMIEKLGIRHYELAN
YEADDIIGTLDKMAEAPDVNFDVTIVTGDKDMIQLVDGNTRVEISKKGVAEFEEFTPDYL
LEKMGLTPAQFIDLKALMGDSSDNYPGVTKVGEKTGLKLLQEFGSLENLYENVDSLKASK
MKENLIADKEMAFLSQQLATINTKAPIEIGLDDTLLKDKKVDELSQFYDEMGFAQFKSKL
LTEAGGEVTDEKVVDEIDFEIVTDGSISEKVNADDFFYLETLGENYHREQIVAFAWGNAE
KIYVSKNIDLLTKMKFPENTYDFKKNRVLLSHLDIELPLVKFDAMLAKYLISTTEDNKIS
TIARLFNSGHLATDEEVFGKGTKIALPDDAVLFEHLARKIKVLALAKEKMMAELLENEQE
HLLADMELPLAEVLAKMEITGIAVSQNTLEEIGAENEEKLASLTREIYDLAGEEFNINSP
KQLGVILFEKLQLPVGKKTKTGYSTAVDVLEDLAALSPVVAKILEYRQINKVQSTYVKGL
IPQIADDGKIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEEGRKIRKAFVPSKDSLLLSSD
YSQIELRVLAHISGDEHLIDAFKHGADIHTSTAMRVFGIEKAEDVTANDRRNAKAVNFGV
VYGISDFGLARNLGITRKDAKNYIETYFERYPGIKTYMENIVREARDKGFVETMSHRRRK
IPDINARNFNVRGFAERTAINSPIQGSAADILKIAMINLDKALSARDFKSKLLLQVHDEI
ILDVPLEELDEIKALVKQTMEEAIELAVPLKVDENTGKTWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaagagataggaaataaaatggagaacaaggacagacttttactaattgatgggtca
tcggttgcctttcgggccttttttgcgctatataatcagatagatcgctttaaagcgcca
aatgggttacatactaatgctatttttgcatttcatacaatgctttcttctttgatggaa
cggattgagcccacacatgttttgattgcatttgatgcaggaaaaacaacttttcgtacg
gaaatgtttgctgactataaaggcggacgttcaaaaacaccagatgaatttcgtgagcaa
ttaccttttatcaaggaaatgattgagaaattgggaattcgccattatgagttagctaac
tatgaggctgatgatattattgggactttggacaaaatggcggaagccccagatgttaat
tttgatgttactattgtgacgggtgataaggatatgattcagcttgtggatggaaatacg
cgagttgaaatttctaagaagggggttgctgagtttgaggagtttacacctgattatctt
ttagaaaaaatgggattgactccagctcaatttattgatttaaaagcattaatgggcgat
tcttctgataattaccctggcgtgacaaaagttggcgaaaaaactggtcttaaacttttg
caagagtttgggtcacttgaaaatctctatgaaaatgttgattctttgaaagccagcaaa
atgaaagaaaatctaattgctgacaaagaaatggcttttttgtcacaacaattggcaacg
ataaatacgaaagctccaattgaaattggcttagatgatacgcttttaaaagataaaaag
gttgatgaacttagtcaattttatgatgaaatgggctttgctcaattcaaaagtaaatta
ttgactgaggctggtggagaagttactgacgaaaaagttgttgacgaaattgattttgaa
atagttactgatggctctatcagtgaaaaggtaaatgctgatgatttcttctatttggaa
actttaggggaaaattatcatcgtgagcaaattgtggcttttgcctggggaaatgctgag
aaaatttatgtttctaaaaatatagatttactgacaaaaatgaagttccccgaaaatact
tatgatttcaagaaaaatcgggtacttttgagtcacttggatatcgaattacctttggtc
aaatttgatgcaatgcttgcaaaatatctaatttcaacaacagaagataataaaatttcg
acgattgcaagacttttcaatagcggacatttggcaacggatgaagaagtttttggcaaa
gggacaaaaattgctttacctgatgatgcggttttatttgaacatttagctcgtaaaatt
aaagtgcttgccttggccaaagaaaaaatgatggctgaattgcttgaaaatgaacaagaa
caccttttggctgatatggaattaccattagcagaagttttagcaaaaatggaaattaca
gggattgctgtcagccaaaatacgctggaagaaattggtgcggaaaatgaagaaaaattg
gcttctttgacgcgcgaaatttatgatttggctggtgaagaatttaatattaattcacca
aaacagttgggtgtgattttatttgaaaaattacagctaccggttggaaagaaaacaaaa
acaggctattcaacggcagtggatgttttagaagatttagctgctttatctcccgttgta
gcaaaaattttggaatatcgtcaaatcaataaagtacaatcaacttatgtgaaaggtctg
attcctcaaattgctgatgatggaaaaattcatacacgttatgttcaagatttgactcaa
actggacgtttgagctcagttgacccgaatttacaaaatattcctgttcgacttgaggag
ggacgaaaaattcgtaaagcttttgtcccaagcaaagattcgcttttattgagttctgac
tattcacaaattgaattgcgggttttggcacatatttctggggatgaacatttaattgat
gcctttaaacatggagctgatatccatacttcaacggctatgcgtgttttcggcattgaa
aaagcagaagatgtgactgctaatgatcgtagaaatgctaaagcagtcaattttggagta
gtctatggaatttccgattttggtttagcaagaaatcttggaattacaagaaaagatgct
aaaaattacattgaaacttattttgaacgttatcctgggattaaaacctatatggaaaat
attgttcgtgaggcacgagacaaaggttttgttgaaacaatgagtcaccgtcgtcgtaag
attccagatattaatgctcgtaattttaatgttcgtggttttgcagaacggacggctatt
aactcaccaattcaaggttcggcagctgatatcttaaaaattgcgatgattaatttggat
aaagctttgagtgctcgtgattttaaatcaaaattattattgcaagtacacgatgaaatt
atccttgatgttcctttagaggaattagatgaaattaaggccttggtaaaacaaacgatg
gaagaagcgattgaacttgctgtcccattaaaagtggatgaaaatactggtaagacttgg
tatgaagctaaataa
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