Lactococcus lactis subsp. lactis CV56: CVCAS_0216
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Entry
CVCAS_0216 CDS
T01964
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVCAS_0216 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_0216 (ung)
Enzymes [BR:
llt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CVCAS_0216 (ung)
DNA repair and recombination proteins [BR:
llt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVCAS_0216 (ung)
Prokaryotic type
CVCAS_0216 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
ADZ62884
LinkDB
All DBs
Position
220486..221145
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AA seq
219 aa
AA seq
DB search
MKKTDWSQPLRNRLAEDYFPKMIEFINQTYQEGKVYPPENQIFRAIELTPLAQTKVIIVG
QDPYPQPGKAQGLAFSYPATFKVNRPDSIVNIQKELREEGFSKDDSDLTAWAEQGVLLLN
AVLTVPEFASNAHAGKIWEPLTDEIIKIASDDERPKVFILWGGFARKKAKLIDGSKHLIL
EAAHPSPLSASRGFFGSHPFSKTNEFLVESGQSPIDWSK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacagattggtcacaacccttacgcaatcgattagcagaagattattttcct
aaaatgattgaatttatcaatcagacttatcaagagggcaaagtatatccaccagaaaat
caaatttttcgggcgattgaattgactcctttggcacaaacaaaggttatcattgttggg
caagacccttaccctcagcccgggaaagctcaaggcttggctttttcttatcctgctact
ttcaaagtgaatcgtccagactcgattgttaatatccaaaaagaattgcgtgaggaaggt
ttttctaaagatgacagtgatttgacggcttgggccgaacaaggtgttttacttctaaac
gcagttctgaccgtacctgagtttgcttcaaatgcccatgctggtaaaatttgggaaccg
ttgacagacgaaattatcaagattgcctcagatgatgagcgaccaaaagttttcattctt
tggggtggttttgctagaaagaaagccaaactaattgatggaagtaagcatctcatacta
gaagcggcgcatccgtcacctttgtcagcaagtcgtggattttttggttcgcatcctttc
tcaaaaaccaatgaatttctggttgaatctggtcaaagtccaattgattggagtaaataa
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