KEGG   Lactococcus lactis subsp. lactis CV56: CVCAS_0296
Entry
CVCAS_0296        CDS       T01964                                 
Symbol
ydbA
Name
(GenBank) multidrug/protein/lipid ABC transporter, ATP-binding and permease protein
  KO
K18892  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
llt  Lactococcus lactis subsp. lactis CV56
Pathway
llt02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:llt00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CVCAS_0296 (ydbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:llt02000]
    CVCAS_0296 (ydbA)
Transporters [BR:llt02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    CVCAS_0296 (ydbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_22 AAA_30 AAA_15 Zeta_toxin AAA_23 AAA_14 DEAD AAA_29 NB-ARC AAA_21 AAA_7 RsgA_GTPase AAA_16 AAA_24 DO-GTPase2 TsaE
Other DBs
NCBI-ProteinID: ADZ62961
LinkDB
Position
298709..300703
AA seq 664 aa
MENTKSTRKMSDTTRAIRFFYLYLKRYKLQFAVIMIFIILATWLQVVSPSLLGDAITNLT
KYVTDFFTHQHAGQSQDALQQIAQQLSQQMHQTVDWHNVPEVVKSLPQAAQDQITANLPK
GTTLETLKTVATSHAASTSTFMKGMWQLLAVYVATGVSMLIYTLLFSRIVAHSTNRMRKG
LFGKLERLTISYFDRHQDGDILARFTSDLDNIQNTLNQALVSVISNAAVFVGVIIQIFNK
DVTFAWLTVAASPVAILSAVIIIRQSKKATDKQQEEVSQLNAYMDEKISGQKAIIVEGLQ
EDSINGFLEHNENVKKRTFAAQAWSGMIFPLMNGFQLLSIAIVIFGGTAYVLNDDSMSIA
TGLGLLVAFVQYVQSYYNPIMQISSNFGQLQLAITGATRLNVMFDEPEEVRPENGKKFDT
IKDGIQIENLDFEYLPGKPVLKKVNIDVKKGQMVALVGPTGSGKTTVMNLMNRFYDVNGG
AIKFDGTDIREFDLDSLRSNVGIVLQESVLFDGTIADNIKFGKPNATQEEIETVAKTTHI
HDFIDSLPDKYETHVSDDESVFSVGQKQQISIARTILTNPELLILDEATSNVDTVTEQQI
QWAMEAAIAGRTSFVIAHRLKTILNADKIVVLKDGEVIEEGNHHELVAQGGFYSELYHNQ
FVFE
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggaaaataccaaatcaacaagaaaaatgtctgacaccacacgtgccatccgatttttt
tacctctatctgaaaagatataaactccaatttgctgtaattatgattttcatcatttta
gcaacttggttacaggttgtttctccatcacttttgggggacgccatcactaatttgact
aaatatgtgactgacttctttacacatcaacatgctggtcaatcccaagatgcactacaa
caaattgctcaacaattaagccaacaaatgcaccaaacagtagattggcacaatgttcct
gaagttgtgaaatctttgccacaagcagcacaagaccaaatcactgctaatcttcctaaa
ggaacaactttagaaacacttaaaacagtggcaacttcacatgcagccagcacttctaca
ttcatgaaaggaatgtggcaattgcttgcagtctatgtagcaacaggtgtatcaatgttg
atttataccttgctctttagtcgtatcgttgctcattcaacaaatcgcatgcgtaaaggt
ttgtttggtaaacttgaacgtttgacaatttcatattttgaccgtcatcaagatggtgat
atccttgctcgtttcacatctgacttggataacattcaaaatactttaaaccaagcactc
gtttcggttatttcaaatgctgcggtctttgtgggtgtcattatccagattttcaataaa
gatgtgacatttgcttggttgacagttgctgcttctccagttgccattttatctgctgtg
attatcattcgtcaatcgaaaaaagcaacagacaaacaacaagaagaagtttcacaactt
aatgcctatatggatgaaaaaatctctgggcaaaaagcaattatcgttgaaggtttacaa
gaagattctattaatggattcttggaacacaatgaaaatgttaaaaaacgtacctttgct
gctcaagcatggtctggtatgattttcccattgatgaatggtttccaacttttatcaatt
gccattgttatctttggtggaacggcctatgttcttaacgatgatagcatgtcaattgcc
acaggtttagggcttttggttgcctttgttcaatacgttcaaagttactacaacccaatc
atgcaaatttcatcaaactttggtcaacttcaacttgccatcacaggggcaactcgtctg
aatgtcatgtttgatgaaccagaagaagttcgtcctgaaaatggtaagaaatttgatacg
attaaagacggaattcaaatcgaaaatcttgattttgaatatcttccaggaaaaccagtc
ctcaaaaaagttaatattgatgttaaaaaaggacaaatggttgccctcgttggtccaact
ggttcaggtaaaacaacagttatgaacttgatgaaccgtttctacgatgttaatggtgga
gcaattaaatttgatggaactgatattcgtgaatttgatttagatagcttgcgttcaaat
gtcggaattgttttgcaagagtctgttctctttgatggaacgattgctgataatatcaag
tttggtaaaccaaatgctactcaagaagaaattgaaacagtggctaagacaactcacatt
catgatttcattgatagcttacctgacaagtacgaaacacatgtttcagatgatgaatca
gtcttctcagttggtcaaaaacaacaaatttctatcgcacgtaccattttgacaaatcca
gaacttttgattttggatgaagcaacttcaaatgtggatacagtaactgaacaacaaatt
caatgggcgatggaagctgctattgctggtcgtacttcattcgttattgctcaccgtttg
aaaacaattcttaatgcagataagattgttgttcttaaagatggtgaagttatcgaagaa
ggaaatcaccatgaacttgttgctcaaggtggcttctactctgaactttatcacaatcaa
tttgtttttgaataa

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