Lactococcus lactis subsp. lactis CV56: CVCAS_0393
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Entry
CVCAS_0393 CDS
T01964
Symbol
rheB
Name
(GenBank) DEAD/DEAH box family ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llt03019
]
CVCAS_0393 (rheB)
03009 Ribosome biogenesis [BR:
llt03009
]
CVCAS_0393 (rheB)
Enzymes [BR:
llt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CVCAS_0393 (rheB)
Messenger RNA biogenesis [BR:
llt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVCAS_0393 (rheB)
Ribosome biogenesis [BR:
llt03009
]
Prokaryotic type
rRNA helicases
CVCAS_0393 (rheB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADZ63057
LinkDB
All DBs
Position
400882..402222
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AA seq
446 aa
AA seq
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MKFTDFNFKDYINQTLENIKFEKPTEVQEKLIPIVLSGRDLVGESKTGSGKTHTFLLPIF
QKIDTDLDEVQAVITAPSRELATQIYKAAQEFTKVNDKLRVSNFVGGTDKARQIKKLESS
QPHVVIGTPGRIHDLIKSNALIVHTANTFVVDEADMTLDMGFLADVDQIASSFGKRVQML
VFSATIPQKLQPFLKKYLHNPVMQKIANKTVISDTIENWLVSTKGSSHNQLLLQLTKATN
PYMAMIFANTKGRVDDIHHFLTSNGLKVAKIHGDVPPRERKRIMNSIKNLDYQYVVATDI
AARGIDIEGVSHIINDEIPKDLTFFVHRVGRSGRNGLQGTAITLYSPSDDSSIREIEKMG
VTFQPKAIKDGEIVDSYDRDRREKRTKKQDEISTKTIGALKKGKKHVKPGYKRAIKWQIE
EDNKKKRRAERNKNARKTRDSRKQSF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagactttaattttaaagattatattaaccaaacgttagagaatatcaaa
tttgaaaaaccaactgaagtacaagaaaaattgattccaattgttctctcaggccgtgac
ctggtaggggaatcaaaaactggttcaggaaaaacacacacttttttactcccaattttc
caaaaaattgatactgatcttgatgaagtgcaagcagtcattacggctccttcacgtgaa
ttagctactcaaatttacaaagcagctcaagaatttacaaaagttaatgacaagcttcgt
gtttcaaactttgtcggtgggactgataaggcccgtcaaatcaaaaaattggaatcatca
caaccacatgtcgtaattggaacaccaggtcgaatccatgacttaatcaaatctaatgct
ttaattgtgcatactgctaatacttttgttgtcgatgaagcggatatgacacttgacatg
ggatttttggcagatgttgaccaaattgcttcaagttttggtaaacgtgtacaaatgctc
gttttctcagcaactattcctcaaaaacttcaaccatttttgaaaaaatatttgcataat
cctgtcatgcaaaaaatcgccaataagacagtaatttcagatacaatcgaaaattggctt
gtttctaccaaaggaagttctcataatcaacttttgctccaattgacaaaagcaacgaat
ccttacatggcaatgatttttgccaataccaaaggtcgtgttgatgacattcatcatttc
ttgacaagtaacggacttaaagttgcaaaaattcatggtgatgtaccgccacgtgaacgt
aaacgtatcatgaattcaattaaaaatttggattatcaatatgttgtggcaaccgatatt
gccgcgcgtggaattgatattgaaggtgtgtcacacattatcaatgatgaaattccaaaa
gatttaactttctttgttcaccgagtgggccgttctggccgtaatggattacaaggaaca
gccattacactctatagtccttctgatgattcaagtattcgtgagattgaaaaaatgggt
gttacattccagccaaaagctattaaagatggtgaaattgttgattcttatgaccgtgac
cgtcgtgaaaaacggacgaaaaaacaagatgaaatttcaacaaaaaccattggtgccctt
aaaaaaggtaaaaaacacgttaaaccaggttacaaacgtgcaattaaatggcaaattgaa
gaagataacaagaaaaaacgccgtgctgagcgtaataaaaatgcccgtaaaacacgtgat
tctcgtaaacaaagtttctaa
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