Lactococcus lactis subsp. lactis CV56: CVCAS_0861
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Entry
CVCAS_0861 CDS
T01964
Symbol
yjcA
Name
(GenBank) ABC transporter ATP binding protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CVCAS_0861 (yjcA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llt02000
]
CVCAS_0861 (yjcA)
01504 Antimicrobial resistance genes [BR:
llt01504
]
CVCAS_0861 (yjcA)
Transporters [BR:
llt02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
CVCAS_0861 (yjcA)
Antimicrobial resistance genes [BR:
llt01504
]
Gene variants
Macrolide resistance genes
Transporters
CVCAS_0861 (yjcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_15
MMR_HSR1
AAA_29
RsgA_GTPase
RNA_helicase
Dynamin_N
RNA_pol_Rpb1_2
Ig_NUP210_15th
ABC_tran_Xtn
DUF5615
Motif
Other DBs
NCBI-ProteinID:
ADZ63515
LinkDB
All DBs
Position
902862..904403
Genome browser
AA seq
513 aa
AA seq
DB search
MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSIT
TDKNFVYFPQLLTEEDFNDKDKSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFE
QWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFLDEDNFPLIDEPTNQLDLESR
KIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFEL
AEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVE
NKEKLLKNIEKTEPLIMNFQPSHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVG
PNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIYDNRGYLKDFATEYQLNYELF
LANLRKLGMERKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQII
QLLETYHPTMLLVEHDQAFVEKISNQIINLKDT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattgaatttaaagacttaacctttggctacggggataatctgattttcaat
catgcccaaataaatattgatgaccgttggaaattaggattagtagggcgaaatggccgt
ggaaaatcaacccttttaaacttactacaaggtaaaataactactgacagctcgataact
actgacaaaaactttgtttacttcccccaattactgacagaagaagattttaatgataaa
gataaatctaaaaaacaaaatactgctgataaatattctgtagaaagtctgtcagtaaaa
attactgacagaaattcacaattaacttattatgtgctaaatgaattagccgaatttgaa
caatggaaattagaacgtgaattatctttattgaaagttgatttagaaattctttggcgt
ccttttggaagtttatcaggtggggaacaaaccaagtgtctcttggcaattttattttta
gatgaggacaattttccactaattgatgaaccaacaaatcaattggatctggaaagtaga
aaaatagttgctgactatcttcaaaagaaatcaggatttatcgttgtatcacatgaccga
aattttcttgacgaagtctgtgaccacaccttggcaattgaacgtcagcaaatagttctc
tatcagggaaatttctcaacctatgaacgagagaaacagttgcgtgatgactttgaactt
gctgaagacgaaaaattacgtaaagatatttcaaggctgaaaaagacttcgttagaaaaa
agagattggtctaatcaacgagaaaatgttgccggagcaacctttgtggataaaaaagtt
gccaaaaaacagaatcaacgagcaaaatcaattgaaaaacgaatgggacaggaagttgag
aataaagagaaattactcaaaaatatcgaaaaaactgaacctcttatcatgaattttcaa
ccttcacatcataaaagactgattcagtttgaaaatttttctcttggatttaccgaaaaa
ttacttttccagccgattgatttttctttgaaagtgggagagattgcagcaattgtcgga
ccaaatggtcaagggaaatcaagtatttttaaatatttatcgggtgatttttctggtgag
cacagtggatttgttcaatttcctcagggaataaggctatcatttgtccgtcagatttat
gataatcgtggttatctgaaagactttgctaccgaatatcaattaaattatgaattattt
ttagctaatctcagaaaactggggatggagcgcaagcaatttagccaaaagatagaaacg
atgagtcaagggcaacaaaaaaaggttgaattagctcgtagtttatcacaagaagcagag
ctttatctctgggatgagccgcttaattatcttgatgtgtttaatcgtgaacaaataatt
caacttctagaaacttatcatccaacaatgcttctggtcgaacatgatcaagcttttgtt
gaaaaaatttctaatcaaattattaacctaaaagatacataa
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