Lactococcus lactis subsp. lactis CV56: CVCAS_1092
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Entry
CVCAS_1092 CDS
T01964
Symbol
pcrA
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03420
Nucleotide excision repair
llt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVCAS_1092 (pcrA)
03430 Mismatch repair
CVCAS_1092 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1092 (pcrA)
Enzymes [BR:
llt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVCAS_1092 (pcrA)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVCAS_1092 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CVCAS_1092 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
CdiI_ImmP
Motif
Other DBs
NCBI-ProteinID:
ADZ63740
LinkDB
All DBs
Position
1118649..1120925
Genome browser
AA seq
758 aa
AA seq
DB search
MNPLLQGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAKEMRERALSLTPRAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGDQKSLM
KRILKEANLDPKKWEPKGLLNAISNAKNDLLDESAYEAQTSARHPYEMVVARVYKIYQKE
LRKAESMDFDDLIMQTLRLFDENPDVLSYYQGKFQYIHVDEYQDTNHAQYQLVKLLASRF
QNICVVGDADQSIYGWRGADMQNILDFEKDYPKAKVVLLEENYRSTKTILDAANNVIKNN
LKRRPKELWTQNDAGDKIVYFRAGNEQEEANKVSEIITSGIRSGRSYADYAVLYRTNAQS
RTIEDSFVKSNIPYTMVAGTKFYSRKEIRDVIAYLNVVANPADNMSFERIVNEPKRGVGP
GALEKLRRFADSRGLSLADSSFDIMLSDIRGKAAGEIYNLAMAFDLLRTHSESSTITELV
EEMLERTGYVKALQMMPSIENQARIENIEEFLSVTKGFDEKSEIPLDEETGEPIVETGLD
KLSRFLNEVSLLSETDAYEEESDQVTMMTLHAAKGLEFPIVFLIGMEENIFPLSRVNEDI
DELEEERRLAYVGITRAEETLYLMNANQRVLYGKTNYNRPSRFISEIDDELLEYAGIARK
ANSSFNASYKSGGFASGISMSDALHQRKAVINPTAAQATINNSETEDWQIGDTAIHRKWG
EGMVLGISGSGKNMELKINFPEVGMKRLLAAMAPIEKK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactattacaaggaatgaacgaaaaacaagcagaagcggtccaaactacagaa
gggcctttattgattatggcaggagctggttcgggtaagactcgtgtcttaactcatcga
attgcttacttaattgatgaaaaaatggttaatccttggaatattttagcgattaccttt
acaaataaagcagcaaaagaaatgcgggagcgtgctttatcacttactccaagagcacaa
gatacattaattgcgacctttcactcaatgtgtgtaagaattttgagacgtgatgccgat
catattggttataatcgtaattttacaattatagatccaggggaccaaaaatcgttgatg
aaacgaattttgaaagaagctaatttagatcctaaaaaatgggaacccaaagggctttta
aatgcgatttcaaatgctaaaaatgatttattagatgaatcagcttatgaagctcaaaca
agcgctagacatccatatgaaatggttgttgcgcgtgtttataagatttaccaaaaagaa
ttacgaaaagcagaatcaatggattttgacgatttaatcatgcagacgttgcgccttttt
gatgaaaacccggatgtcctttcttactatcaaggaaaatttcaatatattcatgttgat
gagtatcaagataccaaccatgcacaatatcagttggttaaacttttagccagtcgtttt
caaaatatctgtgtcgttggggatgctgaccaatcaatctatggttggcgcggagcagat
atgcaaaatatcttagactttgaaaaagattatccaaaagctaaagttgttttgcttgaa
gaaaattaccgctcaacaaaaacaattcttgatgcggcaaacaatgttataaaaaataat
ttaaaacgtcgaccaaaagaactctggacgcaaaatgatgctggagataagattgtttat
ttccgcgctggaaatgaacaagaagaagcaaataaggtttctgaaattatcacatcaggc
attcgttcaggacgttcttatgctgactatgctgtgctttatcggactaatgctcagtct
cggacaattgaagattcttttgttaaatctaatattccctatacaatggttgcgggaact
aaattctactcacgtaaggaaattcgtgatgttattgcttacttaaatgtagtagcaaat
ccagcggataatatgagttttgaacgaattgttaatgaacctaaacgaggagtcggtccg
ggggcattagaaaaattacgtcgttttgctgacagtcgtggactttctttagcagattca
agttttgatattatgttatccgatattcgtggaaaagcggctggtgagatttataatttg
gcaatggcctttgatttgttgagaacccatagtgaaagttcaacaatcacagaattagtt
gaagaaatgttagagcgtactggctatgtcaaagctttgcaaatgatgccaagtatcgaa
aatcaagcacgaattgaaaatattgaagaattcttgtcagtaactaaagggtttgatgaa
aaatcagaaattcctctagatgaagaaacgggagagccaattgttgaaactggattagat
aagttgagccgtttccttaacgaagttagtttgctttctgaaacagatgcttatgaggaa
gaatctgaccaagtaacaatgatgaccctgcatgcggcaaaaggtttggaatttccaatt
gttttcttaattggaatggaagaaaacatttttcctttatcacgggtaaatgaagatatt
gatgagttggaagaagaacgtcgtttggcttatgttggaattacacgggcagaagaaacg
ctctacttaatgaatgccaatcaacgtgtgctttatggtaaaacgaattataatcgtccc
agccgttttatttcggaaattgatgatgaattactagaatatgctgggattgctcgtaaa
gcaaattcaagcttcaatgcttcttataaatctggtggttttgccagtgggatctcgatg
tcagatgcgcttcatcaaagaaaagcagtcattaatccaactgcagctcaagcgacgatt
aataattctgaaacagaagattggcaaattggcgatacagcgattcaccgtaaatggggc
gaaggtatggtattaggaatttctggttctggtaaaaatatggaactcaagattaatttc
ccagaagtcggaatgaaacgtttattagcagcaatggctccaattgagaaaaaatag
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