Lactococcus lactis subsp. lactis CV56: CVCAS_1154
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Entry
CVCAS_1154 CDS
T01964
Symbol
rumA1
Name
(GenBank) 23S rRNA uracil-5-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llt03009
]
CVCAS_1154 (rumA1)
Enzymes [BR:
llt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CVCAS_1154 (rumA1)
Ribosome biogenesis [BR:
llt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CVCAS_1154 (rumA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
TRAM
Methyltransf_25
MTS
PrmA
PCMT
TRM
N6_N4_Mtase
DOT1
Methyltransf_11
UPF0020
CMAS
Motif
Other DBs
NCBI-ProteinID:
ADZ63799
LinkDB
All DBs
Position
1180060..1181442
Genome browser
AA seq
460 aa
AA seq
DB search
MCYNMDMTNFKKNDIFEAEVLDLTHEGQGVVKIDSFPFFVDNALPGERIKMHVLKVGKSF
GFGRVDEFISQSKHRVTQLNLDYLRTGIADFGHLSYDEQVKFKHKQVVDILRKTAGKSDY
PVLPVVEAIKTINYRNKAQIPVQMVDGLLTTGFYRKNSHTLIPVEDFYIQHPEIDAVVLF
LRDEFRKINLQAYDEKTRKGWLRNIVVRRAFHTGEMMITLVVTSKKLPEKVELVIDHLVE
RFTNIKSVQLNINSGTGSFILGKEFILLYGKDFITDLMLDKTYQISAPAFYQVNTPQAEK
LYETAYEFAGLKPGDVVIDAYSGIGTIGISMADRVAKVYGMEVVPAAVENAKRNAQLNEL
ENTHYEVGTAEKIMPKWLSEGIKPDVIFVDPPRKGLDEGFIKAAAMMNPRRIVYISCNPA
TFARDVVRFEAEGYLLDKVQPVDLFPQTHHIELVASFNKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtgttataatatggacatgacaaatttcaagaaaaacgatatatttgaagcagaagtc
cttgacttaacacatgaaggacaaggggttgttaaaatcgactctttccctttctttgtg
gataatgctttacctggggaacgtatcaaaatgcatgtgcttaaggttgggaaatctttt
ggatttgggcgtgtggatgaatttataagtcagagtaaacatcgtgttactcagcttaac
cttgattatttgcgcaccggaatcgcagattttggtcatctatcttatgatgaacaagtg
aaatttaaacataagcaagtagtagatattttgagaaaaacagctggtaaatctgattat
ccagttttaccagtagttgaagcaattaaaacaattaattatcgaaataaagcacaaatt
cctgtccaaatggttgacgggcttttaactacaggattttatcgaaagaattctcatact
ttgattcctgtggaagatttttatattcaacatcctgagattgacgctgtggttcttttt
ttgcgcgatgagtttcgaaagattaatttacaagcttatgatgagaaaacaagaaaaggt
tggttgcgaaatattgttgtccgtcgagcatttcacacgggtgaaatgatgattacttta
gtcgttacaagtaaaaaacttccagaaaaggttgaacttgtgattgatcatttggttgaa
cgttttacaaatataaaatctgttcaattaaatattaattctggaacaggttcatttatt
ttaggaaaagaatttattttattatacggcaaagatttcatcacagatttgatgctagat
aaaacttatcaaatttcggctcctgccttttatcaagttaacacacctcaagctgaaaag
ctttatgaaactgcctatgaatttgcgggtttaaaaccaggtgatgttgttattgatgca
tactctggaattggaacaattggaattagtatggctgatagagttgcaaaagtctatggc
atggaagttgttccagcagccgttgaaaatgctaaacgtaatgctcaattaaatgaactt
gaaaatacacattatgaggttggaactgctgaaaaaatcatgcctaaatggctttcagaa
ggaataaaacccgatgtcatttttgttgatccaccaagaaaagggttggatgaaggcttt
attaaagcagcagcaatgatgaatcctcgacgtattgtttatatttcttgtaatccagca
acttttgctcgtgatgttgttcgctttgaagctgaggggtatttgctggataaagttcaa
ccagttgatttattcccacaaacgcatcatattgaattagttgctagttttaataaaaaa
taa
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