Lactococcus lactis subsp. lactis CV56: CVCAS_1287
Help
Entry
CVCAS_1287 CDS
T01964
Symbol
sbcC
Name
(GenBank) exonuclease subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1287 (sbcC)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVCAS_1287 (sbcC)
Archaeal homologous recombinant proteins
CVCAS_1287 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_27
SMC_N
Nuf2_DHR10-like
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADZ63928
LinkDB
All DBs
Position
complement(1336123..1339263)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKPIYLEMNYFGPHENSVVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTGDRD
AKEMRSQFATADDRTSVTFYFKQGNLLYRIERSPEQKLSKKRGSGSTLQKSTAKLAIVDR
VKGIEKNNIAINPKNVGEEITRLLHLNAEQFKKIILLPQNDFLRFLKSSTPDKEAILKRI
FGTYIFTSFSNEIKAKNSEMNAVYLEYDRKQQNLYESSIWNPIELKELEDAAEQEKLDLV
TSLWKDRVARKNEIEGQTFEQEEKVISIEIAYKSALELENQFKNLNNLENDYQQNIIEKS
AIFEENSEYLKKLKWAFPLKESIHELEQDIKQSKSLKNNIAGIISEKAKDEILLKKLTNE
KEDLNKQQENINENKKVAEKIFIQIQLSLQVEKKQSKVEELKLEQADNLTLLESFKANLG
QAVENISTLQDDVISDDYFINKREERNQLELTFRGKLIPTFQKVKHSKDDIVGLELKLKE
NTIALSENKDNLEKAKFAYNEKLKGRRRLMIAQLQSELQEGEACPVCGALEHPFTETIEE
SSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLKTELKTSLDLKKIEADEFEKELSILYS
EFIADYSQIFPDSFDEVSIDESLLNLTKSLELEEVKNDETKVKLADLESKKLELQEKVKD
FEYSNQEFNRQIENLNAEITEIGITETSYNLIRKRNRLMEKADLFEKHLSELMAQLSDIK
IKISSQTASLNSFESQEATLLERISANKEKIKEKFSEQEAFTTEFQILKEWAYDDDLIQI
SQKVEQYKADKARLKVEIKNIQQLIQNKKRPNLALIEEEKKQTNENYVFLQKKLVSAENE
VEQAKSILSELKKVIKQQDKDASKKSAITKLYNAISGRASEDKLRLETYVVQNYLEKILD
YANLHFINQLSNNRYRFELAGEGNNRRMDHGLDINIYDNETGAARSADTLSGGETFIAAL
SIALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQIGENRLVGVISHVEE
MKATIGQRIIINKMGDGRSNIKSVIK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatatatttggaaatgaattattttggcccccatgagaattctgtcgtagat
tttcgactgctagatgaatctcctatatttctaattagtggggacacaggcgctggaaaa
tccacgatatttgacgcgatgacatatgctttgtttggaacaacaacgggtgatagagat
gccaaagaaatgagaagtcagtttgcaacagctgatgataggacaagcgtgacattttat
tttaaacaaggaaatcttttatacagaattgaaagaagtcctgaacaaaaactctcaaag
aaacgaggcagtggatctactcttcaaaaatcaacagcgaaattagctattgtagataga
gtaaaaggaatcgagaaaaataatattgcaataaatcctaaaaacgttggagaagaaatc
actcgtcttttacatctgaatgccgaacaatttaaaaaaataattcttctacctcaaaat
gattttttgagatttttgaagtcttctactccagataaagaggcaatattaaaaagaata
tttggtacctacatttttacatcttttagcaatgagataaaggctaaaaattcagagatg
aatgctgtttatttagaatatgatcgaaaacaacaaaatttatatgaatcatcaatttgg
aatcctattgaattaaaagaactagaagatgcagctgaacaagaaaaactggatctagtc
acgtctctatggaaggatcgtgttgcgagaaaaaatgagatagaaggtcaaacttttgaa
caagaagaaaaagtaatttcgatagaaatagcttataaatccgcgttggaattagaaaat
cagtttaaaaatctaaataatttagaaaatgattaccagcagaatattattgaaaagtca
gctatttttgaagaaaattccgaatatctaaaaaaattgaaatgggcctttcccttaaaa
gaaagtattcatgaattagaacaagatataaaacagtcaaaaagtttaaaaaataatatt
gctgggataatttctgaaaaagcaaaagatgaaattcttttgaaaaaattaacaaacgaa
aaagaggacttaaataaacagcaagaaaatattaatgagaataaaaaagtagcagaaaaa
atatttatccagattcagctatcacttcaagtagaaaaaaaacaatcaaaggtagaggag
ttaaagttagagcaagctgataatctcacactactagaaagttttaaagctaacttggga
caagcagtcgaaaatatttcaactcttcaagatgatgttatttctgatgattactttatt
aataaaagagaagagagaaatcaattagaattaacatttcgagggaaattaattccgacc
tttcagaaagtgaaacattcaaaagatgatattgttgggttagaattaaaattaaaagaa
aacacaatagcgctttctgaaaataaggacaatctagaaaaggctaaatttgcttataat
gaaaaattaaaaggtagaagacgcttgatgatcgcacagctgcaatctgagttgcaagaa
ggcgaagcatgtcccgtgtgtggtgcattagaacatccgtttacagaaactattgaagaa
agctcttataaagaacttggaaatttattgaaagagattgatgaatcacaaaagaaacaa
acagtccttttggagaaaaataaacaattacaacaattaaagactgaacttaaaactagt
cttgatttgaaaaaaatagaggcagatgagtttgaaaaagaactttcaattctttatagt
gaatttattgctgattattcacaaatatttccggattcctttgatgaagtatctattgat
gaaagtcttttaaatttaacgaaatcgttagagttggaagaggtaaaaaatgatgaaaca
aaagtaaagcttgctgatttggagtcaaaaaaacttgaattacaggaaaaagtaaaagac
tttgaatatagtaatcaggagtttaatagacagatagaaaatttaaacgctgaaataacg
gagatagggattactgaaacaagttataatttgataaggaagcgaaataggctaatggaa
aaagctgatttatttgaaaaacatctgtcagaactaatggcacaactttcagatattaaa
ataaaaatttcttcacaaacggccagcttaaattcatttgaaagtcaagaagcaacatta
cttgaaaggataagcgccaataaagaaaaaataaaagaaaaattttctgagcaagaggca
ttcacgacagaatttcaaatattaaaagagtgggcttatgatgatgatttaattcagatt
tcccaaaaagttgaacaatataaagcagataaagcaagattgaaagtcgaaattaaaaat
attcagcaattaattcaaaataaaaagcgaccaaatcttgcattgattgaagaagaaaaa
aaacagacaaatgaaaactatgtttttttgcaaaaaaaattggtgtctgctgaaaatgaa
gtagagcaagcgaagtcaattcttagtgaattaaaaaaagtcataaaacaacaagataag
gatgctagcaaaaaatctgcaattactaagctttataatgcaatttcaggtagagcttcc
gaagataaactaaggcttgaaacatatgtggttcaaaattatttagaaaaaattcttgat
tatgctaaccttcattttattaatcagttgtcaaacaatagatatcgatttgaacttgct
ggcgagggaaataatcgacgaatggatcatggcttagatattaatatttatgataatgaa
acaggggcggctcgttcagctgataccttatcgggtggagaaacatttatagccgcattg
tcaattgctttggctttaagtgaagtcgtacaaaatacagctaatggtgtccaaatagaa
gcactatttattgatgaaggatttggttctcttgaccaagaaacattacaaaaagcaatg
caagctcttgaacaaattggtgaaaatagattagttggagtaattagccatgtagaggaa
atgaaagcaactattggacaacgaattatcataaataaaatgggggatggtagaagtaat
attaaatctgtcattaaataa
DBGET
integrated database retrieval system
