Lactococcus lactis subsp. lactis CV56: CVCAS_1288
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Entry
CVCAS_1288 CDS
T01964
Symbol
sbcD
Name
(GenBank) exonuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1288 (sbcD)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVCAS_1288 (sbcD)
Archaeal homologous recombinant proteins
CVCAS_1288 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
FAS_N
Motif
Other DBs
NCBI-ProteinID:
ADZ63929
LinkDB
All DBs
Position
complement(1339266..1340438)
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AA seq
390 aa
AA seq
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MKFLHTSDWHIGRTLNGFSLLEEQKYAFEQILSLAKQNQVDGIIIAGDLYDRAVPSAESV
ITFNQMLREMNIIEKFPIYMISGNHDGAKRLSYAKDWLDYNNLHLRTSLEEAFIPVETKE
TQIFLLPFFDPMDARIYFSNQGLDEEDTKQIKTIDDAMTLVISKMKSQFNNKKNQVLVTH
FAVSPHKEEIVLTSETPSKVGGLSTLNVSQFADFDYVALGHIHTRLASPSDKVQYSGSPV
KFNTKEASTQKGIFVVEIKEKMLNSNFIPLQVKTDLVVLEEEWEQLISRDFYERQPLNKA
WFAITIKNFDRTKLVGQNLRAQLQKIYGTIIELDYQFEKKQLTRSRSQDIETLDNVEILS
SFYKFTTGETLDDVQTAIIESTFNELEGEK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttacacacatcagactggcatattggaagaacactcaatggtttttcttta
ttggaagaacaaaaatatgcatttgagcaaattttatctttggcaaaacaaaatcaagtt
gatggaattataattgctggagatctttatgaccgagcagttccgagtgcagaatcagtc
ataacattcaatcagatgctgagagagatgaatattatagaaaagtttcctatttatatg
atttcagggaatcatgatggagccaaaagactaagttatgctaaggactggttggattat
aataatttacatctacgaacatcccttgaggaagcctttattccagtggaaacaaaagaa
actcagatttttttacttcccttttttgacccaatggatgcaagaatatatttttcgaat
cagggattagatgaagaggacacaaagcaaattaagacaattgatgatgcgatgacattg
gtaatttctaagatgaaaagtcagttcaataataagaaaaatcaggttttagtcactcat
tttgcggtgagtcctcataaagaagaaattgttttaacaagtgaaaccccatctaaagta
ggtggattatcgaccttaaatgtttcacaatttgcagattttgattatgttgcgttaggt
catattcatacgaggttagcttccccaagtgataaagtacagtattcggggagtccagta
aaatttaataccaaagaagcgtcaacacaaaaaggaatctttgttgttgaaattaaagaa
aaaatgctcaattctaactttattccactacaagttaaaacagatttagtggttcttgaa
gaagaatgggagcaactcataagccgtgatttttatgaaaggcaaccacttaataaagct
tggtttgcgattacaattaaaaattttgatcggacgaaactcgtgggacaaaatttacgt
gcccaactccaaaagatttatggaacaattatagaacttgactatcaatttgaaaaaaaa
caattaacaagaagtaggagtcaagatattgaaacgttagataatgtggaaattctttct
agtttttataaatttactacaggggaaacgctagatgatgtacaaacagcaatcatcgaa
agtacatttaatgaattagaaggagaaaaataa
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