Lactococcus lactis subsp. lactis CV56: CVCAS_1563
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Entry
CVCAS_1563 CDS
T01964
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03030
DNA replication
llt03430
Mismatch repair
llt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVCAS_1563 (holA)
03430 Mismatch repair
CVCAS_1563 (holA)
03440 Homologous recombination
CVCAS_1563 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llt03032
]
CVCAS_1563 (holA)
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1563 (holA)
Enzymes [BR:
llt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVCAS_1563 (holA)
DNA replication proteins [BR:
llt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVCAS_1563 (holA)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVCAS_1563 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
30K_MP_C_Ter
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ADZ64191
LinkDB
All DBs
Position
complement(1631017..1632021)
Genome browser
AA seq
334 aa
AA seq
DB search
MTVFDEFNEIKRKGLPQILVIFGESRELVGELKNQLLTEVNFEPTDLSQAYYDLTPSNSD
LALEDLESLPFFSDSRLVILENLVNLTTAKKSVLDEKQLKRFENFLDDPPETTQLVLILY
GKLDSRLKVVKKLKAKATLLEAQELKSQELIQYFSRISPLPKVVLSLIAAKSNDNFSVMK
QNIDLVQTYVLGREVTLDDVEKVVPKSLQDNIFALTDLIFKGKIDEARDLVHDLTLQGED
LIKILAILTNSYRLYLQVKLFQAKGWQENQQVAFLKMHPYPVKLANQLVRKLNVKSLKNG
LSDLIKLDFDIKTSAADKSYLFDITLIRLTLKKN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatttgatgaatttaatgaaatcaaaagaaaagggctccctcaaattttagta
atttttggtgagtcaagggaactagttggagaattgaaaaatcaactcttaacagaggtt
aatttcgagccaacggatttgagccaggcttattatgacttaactcctagtaatagcgat
ttagcccttgaagatttggaatctctcccttttttctcagattctcggttggtaatcctg
gaaaacttggttaatttaacaacggctaaaaaaagtgttttagatgaaaaacagttgaag
cgctttgaaaattttttagatgatccgccggaaactacgcaacttgttttaatcctttat
ggaaaattggacagtcgtcttaaagttgttaaaaaattaaaagctaaagcaactttactt
gaagcacaagaattaaagagtcaagaattaattcaatattttagtcgaataagtccttta
ccaaaggtagttttgagtttaattgccgctaaatcaaatgataatttttcagtaatgaag
caaaatattgacctcgttcaaacttatgtactagggcgagaagtgacacttgatgatgtg
gaaaaagtcgtcccaaaatcgctacaagataatatttttgccttaactgatttaattttt
aaaggaaaaattgatgaggcgcgtgatttagtccatgatttgaccttgcaaggggaagat
ttaattaaaatattagctattttgacaaattcttatcgtttgtatttacaagtcaaactt
ttccaagccaagggttggcaagaaaatcaacaagttgcctttttaaaaatgcacccttat
cctgtaaaattggccaatcaattggttagaaaattaaacgttaaatccttaaaaaatgga
ctttctgatttaattaaacttgattttgatataaaaacaagtgcagctgataaatcctat
ctttttgatatcactttaatcaggttgaccttgaaaaaaaactga
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