Lactococcus lactis subsp. lactis CV56: CVCAS_1669
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Entry
CVCAS_1669 CDS
T01964
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVCAS_1669 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1669 (recD)
Enzymes [BR:
llt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CVCAS_1669 (recD)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVCAS_1669 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
HHH
UvrD_C
HHH_8
5_3_exonuc
UvrD-helicase
IMS_HHH
Herpes_Helicase
AAA_12
nSTAND3
AAA_28
AAA_16
NPHP3_N
AAA_5
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADZ64296
LinkDB
All DBs
Position
complement(1736259..1738763)
Genome browser
AA seq
834 aa
AA seq
DB search
MIEKTYFTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFY
GQLTQHPKYGEQLQVSQYEKAVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDS
ILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEYGLPSKITFQIYELYKEETIE
KIEENPYQLVEDVKGVGFKTADKIASSLGIEADSPNRFRAALMHEVNTHSQSTGDTYIEA
KNLLEMTIDLLEEARNVEVNPSAVAEEINGLIVDGKVQQEGTKIFENSLYFAEDGIRKSL
TALTNRSGKDFADEKLLTVLAEVERDLEITYDDLQKQAIIGAMNQQFFILTGGPGTGKTT
IINGFIETYARLHQLDLDPDHYNDDVFPILLAAPTGRASRRMNELTGLPAATIHRHLGLG
QDEAEDALGNELSGALLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPSDFTAKKPDRSYFEVSANFV
PQMVEQIASAWQKRGNNPFELQILAPMYKGMAGINAMNVLLQNLFNPLNDRLEFALGDMK
FREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQDELVMDFDGQELTYPRAEWYK
ITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTYLIERFMGENPAAKNLSVEIVSEKVTDKKERSDKEKKPAAPVELQGQIRS
VSKKMPAQVEEISLFEDEEIETLDKGSLTEALILSGNFDPLIGLTQQDFAIFNK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaaacttattttactggttcgattgaggcaatatttttctccaatcccagt
aatttttataaagttctactcattgaaattgatgaaactaatgctgaatatgatgatttt
gaaattgtggttaacgggacaattggggatgtggttgaaggagattcttatacattttat
ggtcaattgacgcagcatcctaaatatggggaacaattacaggtcagtcaatatgaaaaa
gcagtgccgacttctggtgctggtttagttaaatatttttcttcagataaatttcctgga
attggtaagaaaacggcagaaaaaattgttgaaacttttcctgaaaatacggtagattca
attttagaagcgccggagaaattggatggtctattgaccctagccagaaaaaattcattt
atcaaacgattacgtgagaatcatggaatggaaaaagtgctgaccaagcttgcagaatat
ggcttaccaagcaaaatcacttttcaaatttatgaactttataaagaagaaacgattgaa
aaaattgaggaaaatccttatcagcttgtggaagatgttaagggagttggttttaaaaca
gctgataagattgcaagtagtttaggaattgaagcggatagccctaatcgatttcgagcg
gcattgatgcatgaggtcaatacacattcgcaatcaacaggcgatacttacattgaagcc
aaaaatttacttgagatgacgatagacttacttgaagaagctcgtaatgtcgaggtcaac
ccgtctgctgttgcggaggaaattaatggtttaatagttgatggaaaagtgcaacaagaa
ggaacaaaaatatttgagaattccttgtacttcgctgaggacgggattcggaaatcactg
acagcattaactaatcgttcgggtaaagattttgctgatgaaaagttactgacagtattg
gctgaagttgaaagagatttagaaattacttatgatgatttgcaaaagcaagccattatt
ggtgcaatgaatcagcaatttttcattttgactggtggaccaggaactggtaaaacaaca
attattaatggttttattgaaacttatgcccgtcttcatcagctagatttggacccagac
cattataatgatgacgtctttcctatattactggcagcaccgactggtcgagcttcaaga
cggatgaatgagttgactggtcttccagcagcgacgattcaccgccatttgggtttggga
caagatgaagcagaagatgctcttggaaatgaattgtctggtgctcttttgattgttgac
gaattttctatggttgatacttggttagctaataaactttttcaagcgattcctggttca
atgaaagttctccttgttggagatgctgaccagcttccttctgtggggccaggacaaatt
tttgcggatttactaaaaattccagaaattccgtcagtaaaattggataagatttttcgt
caaggggatgattctaccattactgatttagctcaccacatcaaagatgggcaattgcca
agtgatttcacggcgaaaaaacctgaccgttcttattttgaggtcagtgcaaattttgtt
cctcagatggttgaacaaatcgcaagtgcatggcaaaaaagagggaataatccttttgaa
ttacaaatcttagcgcctatgtataaaggaatggccggaattaatgcaatgaatgttctt
ttgcaaaatctctttaatccgcttaatgaccgacttgaatttgctttgggtgatatgaaa
tttcgtgaaggagataaagttcttcatttagtaaatgatgctgaggccaatgtatttaac
ggagatttgggacaaatcgtagaattgattgcagcaaaatatactgatagtaaacaagat
gagttggtgatggattttgatggtcaagaattgacttatccaagagcggagtggtataaa
attactctggcttatgcgatgtccattcataaatctcaaggttcggagttttccacagtt
attgtgccgatggtttcttcgtattcacgcatgttagagcgaaatttgctttatacggca
attacaagggctaaacaaagtctgattttacttggtgaagaacgagcttttgcacaagcg
gtggcgcgtgaaggagcgaatcgaaagacctatctgattgagcgatttatgggagaaaat
ccagcggctaaaaatctgtcagtagaaattgtgagtgaaaaagttactgacaaaaaagaa
agatctgacaaagagaagaagcctgcagcgccagtagaattacaagggcaaattcgttct
gtcagtaaaaaaatgccagcacaagtagaagaaatttctttatttgaagatgaagaaatt
gaaacactggataagggaagcttgacagaagcacttattttgtcaggaaattttgaccct
ttaattggtttaactcaacaagactttgcaatctttaataaataa
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