Lactococcus lactis subsp. lactis CV56: CVCAS_1742
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Entry
CVCAS_1742 CDS
T01964
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVCAS_1742 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llt03019
]
CVCAS_1742 (recQ)
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_1742 (recQ)
Enzymes [BR:
llt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVCAS_1742 (recQ)
Messenger RNA biogenesis [BR:
llt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVCAS_1742 (recQ)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVCAS_1742 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
MC4
Motif
Other DBs
NCBI-ProteinID:
ADZ64368
LinkDB
All DBs
Position
1813895..1815673
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AA seq
592 aa
AA seq
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MNLEAKLKEIFGYDNFRNGQKQIIEQVLDGQATLGILPTGAGKSICYQLPALIQPGLTLV
ISPLISLMKDQVDQLNIAGIPATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDY
FNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVA
DDIQKLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRFV
IHYALPATIESYYQEAGRAGRDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYEK
LRQMQAYTSSETCLQRYILQYFGDEGEDCKKCSNCLDERELLDITIDAQKVLSCVVRMGE
RFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAESYLNITSGK
FPLLLLSAQGLKVLKGQIKVYRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVP
PFMIFSDSALKEMAQVLPDSQSQFLQISGVGPVKLKKYGRLFIDKISEYKKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagctaaattaaaagaaatttttggttatgacaatttccgaaatggtcag
aaacaaattattgaacaagtcctagatggacaagccactcttggtattttacccacagga
gctggaaaatcaatctgctatcagttaccagctcttattcaaccagggcttactctcgta
atctccccacttattagcttgatgaaagatcaagtcgaccagctgaatattgccggaatt
ccagcaacatttattaactctaccttagaggattccgaatcttatcaaagaatgcgacag
gttgaaaatggcgaaatcaagcttctttttgtagcaccagagcgtttttcattagactat
ttcaatgcctttttacaaaaacttccaattgatttagttgccatagacgaagcacactgc
atttcacaatgggggcacgatttcagacccagttatgtcgattttgcctctcatctccaa
tatttaccaacaaatcctaccgtcttagcccttacggctactgcgacaccaaaagttgca
gatgatattcaaaaacttctttcaatttcccccagtcatactattaaaaccggttttctt
agagaaaacttacgttttgaagtagtcaaagggatggataagagaacttttcttaaaaat
tatcttaaaaatcaagaaagtgaggctgctggaattatctatgccagcactcgtaaagaa
gttgaagaaatttgtgaatggctcaaccataatcatttcaaatccgttcgttaccatgct
ggactgagcgaacaggaacgtcaaataaatcaagaactttttctctttgacgaagtaccg
ataatggttgccactaatgcttttggcatgggaatcaataaaccaaatgttcgatttgtg
attcattatgcccttcccgcaacaattgaaagttattatcaagaagctgggcgagcagga
cgggacgggcttgaatctgatgctaacctccttttttcaccaaatgatttacgaattcgt
aatttcttgattgagcaaagtgaaggtgatgaagcgcacaaggaacatgaatacgaaaag
cttcgacaaatgcaagcatacacaagttccgaaacctgtttacaacgctatatcttgcaa
tattttggtgatgaaggtgaagattgtaaaaaatgtagtaattgtcttgatgaaagagag
cttctcgatattacaattgatgctcaaaaagtcctatcttgtgtcgtccgaatgggtgaa
cgttttggtaagacggccgtagcacaagttttgattggttctaaaaataaaaatattgcc
aaatggaattttgaatctctatcgacttttggaattatgaaaaaccattcccaaaagacc
gtgggtgaattaatcgattttctatctgctgaaagttatttaaacattacatcaggtaaa
ttcccacttctccttctttcagcccaaggattaaaagtcctcaaaggacaaatcaaagtt
tatcgcaaagctagcctaattattgaatcgaaaacaaaaatttctcatcattttgatgaa
gaatgttttgcaagtattcgtgcacttcgacttgaactagccaaggaagaaggcgtccct
cctttcatgattttttctgatagtgcccttaaagaaatggctcaagttctgccggatagt
caaagtcaatttttacaaatttctggtgtcggacctgttaaactcaaaaaatatggaagg
ctttttatcgacaaaatatctgaatataaaaaaagctga
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