Lactococcus lactis subsp. lactis CV56: CVCAS_2222
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Entry
CVCAS_2222 CDS
T01964
Symbol
dnaH
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Pathway
llt03030
DNA replication
llt03430
Mismatch repair
llt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVCAS_2222 (dnaH)
03430 Mismatch repair
CVCAS_2222 (dnaH)
03440 Homologous recombination
CVCAS_2222 (dnaH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llt03032
]
CVCAS_2222 (dnaH)
03400 DNA repair and recombination proteins [BR:
llt03400
]
CVCAS_2222 (dnaH)
Enzymes [BR:
llt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVCAS_2222 (dnaH)
DNA replication proteins [BR:
llt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVCAS_2222 (dnaH)
DNA repair and recombination proteins [BR:
llt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVCAS_2222 (dnaH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
RuvB_N
TIP49
AAA_19
AAA_14
AAA_24
RCF1-5-like_lid
AAA_16
AAA_assoc_2
DNA_pol3_gamma3
ORC-CDC6-like
AAA_7
AAA_2
Glyco_tranf_2_5
PIF1
Rad17
DnaX_C
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ADZ64839
LinkDB
All DBs
Position
complement(2266179..2267837)
Genome browser
AA seq
552 aa
AA seq
DB search
MAYQALYRKYRSQRFDEMVGQEVVATTLKNAIVNHQISHAYLFSGPRGTGKTSAAKIFAK
AINCPNQVDGEPCNNCFICDSITKGSLDDVIELDAASNNGVDEIREIRDKSTYAASQATY
KVYIIDEVHMLSTGAFNALLKTLEEPTENVVFVLATTELQKIPATIISRVQRFAFKSITT
GDIRTYLAKIMADEGLEFDGKALDVIAKAAEGGMRDALSLLDQALSFSSGKLEENDALLV
TGSIAADALVTYVAALFEHDEAKALMELDKIFSEGKNMLRFTEDLLAYLRDLLLDKNSQY
DRGQIFSWIDIAIESLKTIKETTQTKIAADVMTMRLAEIGQNNLLTASQGEIPNQLTAEI
ATLKTEINQLKAQISAGQIQVNSDSQNNLLTEKVKGSSKPIASKKRQINKDLIYKALAEA
TNEARKAALSAWPELVGSVTKPADRALLNNTAPVAASENFLVVTFPHENLAKRVSENEEL
QLFCGNLLSSIVGFAPEIISLAEQDWQEVRAEYVSNLKSENVQEDEEDEKEPDETVNLAK
ELFGEKVVEIND
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaagcattatatagaaaatatcgaagtcaaagatttgatgaaatggtgggg
caagaagttgtagcaacaacattaaaaaatgcgattgtcaatcatcaaatttcacatgct
tatcttttttctggtccaagagggacagggaaaacctcagcagctaaaatttttgctaag
gcaataaattgtcctaatcaagtggatggagagccctgcaataattgctttatttgtgac
tcaatcaccaaaggaagcttagatgatgtcattgaacttgatgcggcatcaaataatggg
gttgacgaaattcgagaaattcgagataaatcaacttacgcagctagtcaagctacttac
aaggtttatattattgatgaagtgcatatgctttcaacaggggcttttaatgcacttttg
aaaacactagaagaacctacagaaaatgttgttttcgtcctggctactactgaattacaa
aaaattccagcaaccattatctcgcgtgttcaacgttttgcttttaaatcaatcacaaca
ggagacattcggacttatttagcaaaaataatggctgatgaaggacttgaattcgacggt
aaagcactcgatgttattgctaaagcagctgaaggtggaatgcgtgatgccctctcttta
ttagaccaagccttatcgttttcatcaggaaaattagaagaaaatgatgcactacttgtc
acagggtcgattgctgcagatgctttagtaacatatgttgcagcactttttgagcatgat
gaagcaaaagcgctgatggaacttgataagattttttctgaaggaaaaaatatgcttcga
tttacggaagatttattagcataccttcgggatttactcttggataaaaattctcagtat
gaccgtggtcaaattttttcatggattgatattgcaattgaaagtttgaaaacgataaag
gaaacgactcaaacaaaaattgcggcagacgtcatgaccatgcgtttggctgaaattgga
caaaataatttactgacagcttcgcaaggagaaatccctaatcagctgacagccgaaatt
gctactttaaaaaccgaaattaatcaattgaaagctcaaatttcagctggtcaaattcag
gtaaattcagattcacaaaataatttactgacagaaaaagttaaaggcagttcgaaacca
atagcatctaaaaaacgccaaattaacaaagatttaatttataaagctttggctgaggcg
acaaatgaagctagaaaagctgctctaagtgcgtggccagaacttgttggttcggtaact
aaaccggcagaccgagctttacttaataatacagcccctgttgctgcgtcagaaaatttc
cttgtggtgacttttcctcatgagaatcttgctaaaagagtcagtgaaaatgaagaattg
caacttttttgtgggaatctcttgagttcaattgttggatttgcgccagaaattatctct
cttgctgaacaagactggcaagaagttcgagcagaatatgtttctaatttaaaatctgaa
aatgttcaagaagatgaagaagatgaaaaagagccggatgaaacggtaaacttagctaaa
gaactctttggtgaaaaagtagttgaaattaatgattaa
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