Labilithrix luteola: AKJ09_00645
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Entry
AKJ09_00645 CDS
T04033
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
llu
Labilithrix luteola
Pathway
llu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AKJ09_00645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llu03021
]
AKJ09_00645
03400 DNA repair and recombination proteins [BR:
llu03400
]
AKJ09_00645
Enzymes [BR:
llu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AKJ09_00645
Transcription machinery [BR:
llu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AKJ09_00645
DNA repair and recombination proteins [BR:
llu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AKJ09_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AKU93981
UniProt:
A0A0K1PKQ8
LinkDB
All DBs
Position
complement(621096..625229)
Genome browser
AA seq
1377 aa
AA seq
DB search
MATAIQSNFRVRKNLGRIQRVIEVPNLIDIQKSSYDKFLQSNVPQNERQETGLQAVFRSV
FPIKDFNGTSELVFVSYNLEKPKYDVDECRQRGMTFAAPIKVTTQLMIYDTRDGGERIVR
DIKEQEVYFGEIPLMTETGTFIINGTERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIYVRIDRRRKMHATVLLRALGYSTQDLLNYFYNTETIYIEKG
GKYSKSVEYDLLAGQRATRDIKVGNEVIVKKNSKFMKATMKKLKEAKIDRLSADPEELAG
KVAAHDVVDKETGEVILEVNEEVTADKLEKLREAGINEFKILFIDGLNVGSYLRDTLLAE
KVKTTEDAIMEIYRRLRPGDPPTLDTARTLFQNLFFNPERYDLSKVGRLKLNYKFYRDVP
EEQRPPIDTQVLTAQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTFARVNEYGFV
ETPYRRAGEGSVTQDVQWYSALEEEAKYIAQASVGVDEKGKFKDSLVSARLNGDYQMVAP
DMIQLMDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLIRSWAPLVGTGMEGK
LARDSGVCVLARRDGFIESVDANRIVIRPDSDKAEIPDIYHLYKFQRSNQSTCFNQKPIV
RAGERVKAGDVLADGPSTDMGELALGQNVMVAFMPWQGYNFEDSILVSERIAKDDVYTSI
HIEEFECVARDTKLGKEEVTRDIPNVGEEALKDLDESGIVRIGAEVKPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVGGIVINARIFARKGTEKDERSKDIEDH
ERIRLEKQRDEEVKILRDSFFRGLKKKLAGQTTTGKLVDDKGKVLLQKGQVLDEAALDEI
PHKYWSELPVVDADDIAGKMRELEEIISVREEQLRDKIDRLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVVSRIMAEEDMPYTQEGRPVDIVLNPLGVPSRMNIGQILEV
HLGWGAQSLGWQLNSMLEHNATDAQLKEHIVKVFEGDKDVSKIVSKLTGEEARQVAQKLK
KGVHYASPVFDGAPEEAIKSSLALANLPSSGQAVLFDGRTGEAFDQEVTVGVMYFLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGTAYALQEFLTVKSDD
VMGRTRMYEAIVKGEYTLEPGLPESFNVLIKELQALCLNVELLEPGQVRAADQAAEE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctatccagtccaacttccgcgtccgtaagaacctgggacggatccaacgt
gtcatcgaggtccccaacctcatcgacatccagaaatcctcgtacgacaagttcctgcag
tccaacgtcccgcagaacgagcggcaagagacgggtctgcaagcggtcttccgtagcgtc
ttcccgatcaaagatttcaacgggacgagcgagctcgtcttcgtgtcgtacaacctcgag
aagccgaagtacgacgtggacgagtgccgccagcgcggcatgacgttcgccgcgccgatc
aaggtgacgacccagctgatgatctacgacacccgcgatggcggggagcgtatcgtccgc
gacatcaaggagcaggaggtctacttcggcgagatcccgctcatgacggagaccggtacc
ttcatcatcaacggtaccgagcgcgtcgtcgtcagccagctccaccgaagcccgggcgtc
ttcttcgaccacgacaagggcaagacccactcgagcggcaagctcctctactcggctcgc
gtcatcccgtaccgcggctcgtggctcgacttcgagttcgacccgaaggacatcatctac
gtccgcatcgaccgccgccggaagatgcacgcgacggtgctcctgcgcgcgctcggctac
agcacgcaggacctcctcaactacttctacaacaccgagaccatctacatcgagaagggt
ggcaagtactcgaagtccgtcgagtacgaccttcttgctggtcagcgtgcgacccgcgac
atcaaggtcggcaacgaagtcatcgtcaagaagaactccaagttcatgaaggcgacgatg
aagaagctgaaggaggcgaagatcgatcgcctctcggccgatcccgaggagctcgcgggt
aaggtcgcggctcacgacgtcgtcgacaaggagaccggtgaagtcatcctcgaggtcaac
gaggaggtcaccgcggacaagctcgagaagctccgcgaagcgggcatcaacgagttcaag
atcctcttcatcgatggtctcaacgtcggcagctacctccgcgacacgcttctcgcggag
aaggtgaagaccacggaagacgcgatcatggagatctaccggcgcctccgccccggtgat
ccgccgacgctcgacaccgcgcgtacgctcttccagaacctgttcttcaaccccgagcgc
tacgacctctcgaaggtcggtcgcctcaagctgaactacaagttctaccgcgacgtcccc
gaggagcagcgcccgccgatcgatacgcaggtgctcacggctcaggacatcctggagacc
gtccgccacctcatcgagctgaagaacggtcgcggctcggtcgacgacatcgaccacctc
ggtaaccgtcgcgtgcgcgccgtcggcgagctcatggagaaccagtaccgcatcggtttg
gttcgtatggagcgcgccatcaaggagcgcatgagcatgtcgcaagagatcgacacgctc
atgccgcacgacctcatcaacgcgaagcccgtctccgccgttgtgaaggagtacttcggc
agctcgcagctctcgcagttcatggaccagaccaacccgctctccgaggtcacgcacaag
cgtcgtctctcggcgctcggacctggcggtctcacgcgtgagcgcgcgggcttcgaagtc
cgcgacgttcacccgacccactacggtcgtatctgcccgatcgagacgccggaaggtccg
aacatcggcctcatcgcgtcgctctcgacgttcgcccgcgtcaacgagtacggcttcgtc
gagacgccgtaccgccgcgccggcgaaggcagcgtcacgcaggacgtgcagtggtactcg
gcgctcgaggaagaggcgaagtacatcgcccaggcctcggtcggcgtcgacgagaagggc
aagttcaaggacagcctcgtgtccgcccgtctcaacggtgactaccagatggtcgcgccc
gacatgatccagctcatggacgtcgcgccgaatcagatggtgtccgtcgctgcggccctc
gttccgttcctcgagcacgacgacgcgaaccgcgcactcatgggcgcgaacatgcagcgt
caggccgttccgctcatccgtagctgggcgccgctcgtcggcaccggcatggaaggcaag
ctcgcgcgtgactccggcgtgtgcgtcctcgcgcgccgcgacggcttcatcgagagcgtc
gacgcgaaccgtatcgtcatccgcccggactcggacaaggccgagatcccggacatctac
cacctctacaagttccagcgctcgaaccagtcgacctgcttcaaccagaagccgatcgtc
cgagccggtgaacgcgtgaaggctggcgacgtcctcgcggacggcccgtcgaccgacatg
ggcgagctcgcgctcggtcagaacgtgatggtcgcgttcatgccgtggcagggctacaac
ttcgaagactcgatcctcgtcagcgagcgcatcgcgaaggatgacgtctacacctcgatc
cacatcgaggagttcgagtgcgtcgcccgcgacacgaagctcggcaaggaagaagtcacc
cgcgacatcccgaacgtcggcgaagaggccctcaaggacctcgacgagagcggcatcgtc
cgcatcggcgccgaggtgaagccgggcgacatcctcgtcggcaagatcacgccgaagggg
gagacccagctctcgcccgaagagaagctgctccgcgcgatcttcggcgagaaggccggc
gacgtccgcgacagctcgctccgcgtccccccgggcgtcggcggcatcgtcatcaacgcc
cgcatcttcgcccgcaagggaacggagaaggacgagcgttcgaaggacatcgaggaccac
gagcgcatccgcctcgagaagcagcgtgacgaggaggtcaagatcctccgcgactcgttc
ttccgcggcctcaagaagaagctcgccggtcagacgaccacgggcaagctggtcgacgac
aagggcaaggtccttctccagaagggtcaggtcctcgacgaggctgctctcgacgagatc
ccgcacaagtactggagcgagctccccgtcgtcgacgcggacgacatcgccgggaagatg
cgcgagctcgaagagatcatcagcgtccgcgaggagcagctccgcgacaagatcgatcgc
ctctccaagggcgacgagcttccgccgggcgtgatcaagatggtgaaggtctacatcgcc
atcaagcgcaagctccaggtcggcgacaagatggcaggccgccacggtaacaagggcgtc
gtctcgcgcatcatggccgaagaggacatgccctacacgcaggagggccgtccggtcgac
atcgtcctcaacccgctcggcgttcctagccgtatgaacatcggccagatcctcgaggtt
cacctcggttggggcgctcagtcgcttggctggcagctcaacagcatgctcgagcacaac
gcgacggacgcgcagctcaaggagcacatcgtcaaggtcttcgaaggcgacaaggacgtc
tcgaagatcgtgtcgaagctcacgggcgaagaggctcgtcaggtcgcgcagaagttgaag
aagggcgtgcactacgcgtcgccggtcttcgacggtgcacctgaagaggcgatcaagagc
tcgctcgcgctcgccaacctgccctcgagcggccaggcggttctcttcgacggccgtacc
ggtgaagcgttcgaccaggaggtcacggtgggagtcatgtacttcctcaagctgcaccac
ctcgtcgacgacaagatccacgcgcgttcgatcggtccgtactcgctcgtcacccagcag
ccgctcggtggcaaggcgcagttcggcggccagcgcctcggcgaaatggaagtctgggcg
atggaggcctacggaacggcctacgcgctccaggagttcctcacggtcaagagcgacgac
gtcatgggtcgtacccgcatgtacgaagccatcgtcaagggcgagtacacgcttgagccg
ggtcttccggagtcgttcaacgtcctcatcaaggagcttcaggcgctctgcttgaacgtc
gagctcctcgagccgggacaggtccgcgccgccgaccaggcagcggaggagtaa
DBGET
integrated database retrieval system
