Labilithrix luteola: AKJ09_00937
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Entry
AKJ09_00937 CDS
T04033
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
llu
Labilithrix luteola
Pathway
llu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKJ09_00937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llu03021
]
AKJ09_00937
Transcription machinery [BR:
llu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ09_00937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF3966
Motif
Other DBs
NCBI-ProteinID:
AKU94273
UniProt:
A0A0K1PL66
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All DBs
Position
930575..931870
Genome browser
AA seq
431 aa
AA seq
DB search
MYFRKMAQVSLLTREGEVELARKIEEGERRIIEAIVDSAFAAAELDHVSRMLYKGRLKVR
DVVRNVDDEDAFDEATMLKIARLLERPLKEVHSAANAKKPEPEAKDAKKAAPGAKKGEAA
KPKKSSRKTKAELARDEIVAQLELLRLDRGIIERVEKKLRLIQREMPAASAKKSTSLALG
EIAGGRRVADRAKSALVEANLRLVVSLAKKHVNRGLQLLDLIQEGNIGLMRAVDKFDYKR
GYKFSTYATWWVRQSISRAIADQGRTIRVPVHMYESLQKLTRTSRSLLQEYGREPTPEEL
AESTGIPVEKVRAVMKIAREPISLETPVGNDGESHVGEFIPDDSGLPPDEAYAQMRFNDQ
TRQLLKTLTPREEKILRMRFGIDESRDHTLEEVGESFSLTRERIRQIETKALRKLRLPSQ
HRKMKTYIGGQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtatttccgcaaaatggcgcaggtatcgctccttacccgagagggtgaggtcgagctc
gcgcgcaagatcgaggagggcgagcggagaatcatcgaggcaatcgtcgactcggcgttc
gcagccgccgagctcgatcacgtgagccgcatgctctacaagggccggctcaaggtgcga
gacgtcgtgcgcaacgtcgatgacgaagacgcgttcgacgaggcgacgatgctcaagatc
gcgcgcctgctcgagcgaccgctcaaggaagtccatagcgcggcgaacgcgaagaagccc
gagccggaggcgaaggacgcgaagaaggccgcgccgggagcgaagaagggcgaggccgcg
aagccgaagaagagctcgcgcaaaaccaaggccgagctggcgcgcgacgagatcgtggcg
cagctcgagctgctccgcctcgaccgcgggatcatcgagcgtgtcgagaagaagctccgg
ctcatccagcgcgagatgcccgccgcctcggcgaagaagagcacctcgctcgcgctcggc
gagatcgccggaggccgccgcgtggctgaccgcgcgaagtcggcgctcgtcgaagcgaac
cttcgcctcgtcgtgtcgctcgccaagaagcacgtcaaccgcggcctccagctcctcgac
ctgattcaagagggcaacatcggcctcatgcgcgcggtcgacaagttcgactacaagcgc
ggttacaagttctccacgtacgccacgtggtgggttcgccagtcgatctcgcgcgccatt
gccgaccagggccgcaccattcgcgtccccgtgcacatgtacgagagcttgcagaagctc
acgcgtacgagccgctcgctcctccaggagtacggccgtgagcccacgcccgaggagctc
gccgagtcgaccggcatccccgtcgagaaggtgcgcgccgtcatgaagatcgcgcgcgag
ccgatcagcctcgagacccccgtgggcaacgacggcgagtcgcacgtcggcgagttcatc
cccgacgactccggcctcccacccgacgaggcctacgcgcagatgcgcttcaacgatcag
acgcgtcagctcctgaagacgctcacgccgcgcgaggagaagatcctccgcatgcgattc
ggcatcgacgagtcgcgcgaccacacgctcgaagaggtcggcgagagcttctcgctcacc
cgcgagcgcattcgccagatcgagacgaaggcgctgcgcaagcttcgcctcccctcgcag
caccgcaagatgaagacgtacatcggcgggcagtag
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