Labilithrix luteola: AKJ09_03556
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Entry
AKJ09_03556 CDS
T04033
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
llu
Labilithrix luteola
Pathway
llu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKJ09_03556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llu03400
]
AKJ09_03556
Enzymes [BR:
llu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AKJ09_03556
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AKJ09_03556
DNA repair and recombination proteins [BR:
llu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKJ09_03556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AKU96892
UniProt:
A0A0K1PTP8
LinkDB
All DBs
Position
complement(3637848..3638690)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETARRLLVTWTKGGTIVRAHATDGRSVLETPRTFARDLEGRVIEDVKRRGKWL
RFELDGGTFLFSHLGMTGRWAKRTVDDEPVRWERARLDVRRKGTIVSARYVDARRFGRLV
VAREDIPEWHELGPDPLVDGVTANALFTSLAKRKRTLKETLLDQSVLAGVGNIHASEALW
KAHLHPLLRSNELAELQASALLRGLHWTFERALAEAEKEGDEPGYINDAGGKNPFKVYDR
EGEPCPRDKTPIERFVLGGRSTYFCKTCQAPPKKKAVRKP
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaagtcgaaaccgcgcgccgtctcctcgtcacgtggaccaaaggc
ggcacgatcgttcgcgcgcacgcgaccgacggacgatccgttctcgagacgccgcggacc
ttcgcgcgcgatctcgaggggcgcgtcatcgaagacgtgaagcgacgtgggaagtggctc
cgcttcgagctcgacggtggaaccttcctcttctcgcacctcggcatgacggggcgctgg
gccaagcgaaccgttgacgacgagccggtccgctgggagcgcgcacgcctcgatgttcgc
cgcaaagggacgatcgtgagcgcacgctacgtcgatgcgcggcgctttggtcgcctcgtc
gtcgcccgcgaagacattcccgagtggcacgagctcggaccggatccgctcgtcgacggc
gtgaccgcgaacgcgctcttcacctcgctggccaagcgcaagcgaacgctaaaagagacg
ctcctcgatcagagcgtgctcgcgggcgtgggcaacatccacgcgagcgaagcgctctgg
aaggcgcacctccacccgctccttcgcagcaacgagctcgccgaactgcaggcctccgcg
ctcctccgcggcctgcactggaccttcgaacgagccctcgctgaggccgaaaaggaaggc
gacgagccgggctacatcaacgacgcaggcggaaagaatccgttcaaggtctacgaccgc
gagggcgagccttgcccgcgcgacaagacgcccatcgagcgtttcgtcctcggcgggcgc
agcacgtatttctgtaagacgtgccaggcgccgcccaagaagaaggcggtccgaaagccg
tga
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