Labilithrix luteola: AKJ09_07378
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Entry
AKJ09_07378 CDS
T04033
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llu
Labilithrix luteola
Pathway
llu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKJ09_07378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llu03019
]
AKJ09_07378
03400 DNA repair and recombination proteins [BR:
llu03400
]
AKJ09_07378
Enzymes [BR:
llu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKJ09_07378
Messenger RNA biogenesis [BR:
llu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AKJ09_07378
DNA repair and recombination proteins [BR:
llu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AKJ09_07378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_22
DUF7563
Motif
Other DBs
NCBI-ProteinID:
AKV00715
UniProt:
A0A0K1Q5Q6
LinkDB
All DBs
Position
7756228..7758117
Genome browser
AA seq
629 aa
AA seq
DB search
MDPLEEALRSRFGLDSFRPWQREAIDAVLGSPGRALVVAPTGGGKSLTYQFPAAVLEGTT
LVISPLVALMEDQVRSLTARGIEATYLASTLELDERNARESAMLRGAYKLVYAAPERLAS
ESFVRMLSRCKIALVAIDEAHCIAQWGHDFRPDYLRIGSLLERLSPPRVLACTATATPEV
RREIIEQLGFANTTFSEVLRGFARPNLHLAAKTVDGPKQARAAVIEALETAIGQPRIPRG
GAIVYAATRKTTEQYAELLRKRGYNAAFYHAGLDGEARTRVADRFASRKFDVVVATNAFG
MGIDRSDIRTVVHVQPPSSIEAYYQEVGRAGRDGDEAQGLLLCSGADIALRRRLVQMGSD
GEAADASLAARAWQLFRDLLRYIDARSCRHDFVLRYFGDERETLGGCGHCDVCQEIAQHA
GDDGTSTEGTTLIVRKALSAVARANKRAGMQAVAEMLHGVDSERTRRFGFTGLTTFGLLK
EHSLPWTVALLRALLAAGWIDLTTTEHPVPVLTRNGVSVMKGEVEARIVLPLEPRSPAPS
SSRGRGKTTRELPPLNPDDQAVFERLRTHRAEIARQKKVPAYVVAMDRTLIEMAMVRPQE
NHELLAVHGMGPGRVEQYGEGFLRVIKGE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtggatccgctcgaagaagcgcttcgctcgcgtttcgggctcgactcgtttcgcccgtgg
cagcgtgaggccatcgacgccgtgctcggctcgccggggcgcgcactggtcgtggcgccg
accggcggaggaaagtcgctcacctatcagttccctgcggcagtgctcgaggggaccacg
ctcgtcatctcgccgctcgtcgcgctcatggaggaccaggttcgctccctgaccgcgcgt
ggcatcgaggctacgtacctcgcctcgaccctggagctcgacgagcgaaacgcccgcgag
agcgcgatgcttcgcggggcgtacaagctcgtctacgcagcgcccgagcgcctcgcctcg
gagtcgttcgttcgcatgctctcgcgatgcaagatcgcgctcgtggcgatcgacgaggcg
cactgcatcgcgcagtggggacacgacttccgccccgactatctccgcatcggttcgctt
ctcgagaggctctcgccgccgcgcgtcttggcgtgcaccgccaccgcgaccccggaggtg
aggcgcgagatcatcgagcagctcggcttcgcgaacaccacgttctcggaggtcctgcga
ggcttcgcgaggcccaacctccatcttgctgcaaagaccgtcgacggtcccaagcaggcg
cgcgcggcggtcatcgaagcactcgagaccgcgatcgggcagcctcgtatcccgcgcggc
ggcgccatcgtctacgccgcgacgcgcaagaccaccgagcagtacgccgagctgcttcgc
aagcgcggctacaacgcggccttctaccatgctgggctcgacggcgaggcccgcacgcgc
gtcgccgaccgcttcgcctcgcgcaagttcgacgtcgtcgtcgcgacgaacgcgttcggt
atgggcatcgaccggtcggacatccgcaccgtcgtccacgtgcagccgccttcgtcgatc
gaggcctattaccaggaggtgggccgcgcaggtcgtgacggcgacgaggcgcaaggcctc
ttgctctgctccggcgcggacatcgcgctgcggcgccggctggtccagatgggaagcgac
ggcgaagcggccgacgcatcactcgccgcgcgcgcctggcagctctttcgcgatctgctt
cgctacatcgacgcgcgcagctgccggcacgacttcgtccttcgctacttcggcgacgag
cgcgaaacgctcggtggttgcggtcactgcgacgtctgccaggagatcgcacaacacgcc
ggcgacgacggcacctccacggagggaacgacgctcatcgtgcgcaaggcgctctcggcg
gtcgctcgtgcgaacaagcgcgccgggatgcaggccgtcgcggagatgctccacggtgtc
gactccgaacggacgcgccgcttcgggttcacggggctcaccacgttcggcttgctgaag
gagcactcgctgccctggacggtggcgctgctccgcgcgctgctcgccgcggggtggatc
gacctcaccacgaccgagcaccctgttccggttctcacacgaaatggcgtgtcggtgatg
aagggcgaggtggaagcgcgcatcgtgctgccgctcgaacctcgctcgcccgctccgtcg
tcgtcgcgaggtcgaggcaaaaccacgcgcgagctccctccactgaaccccgacgaccaa
gccgtcttcgagcgcctgcgcacgcaccgcgccgagatcgcgcgtcagaagaaggtgccg
gcgtacgtcgtcgcgatggaccgcacgctcatcgagatggccatggtgaggccgcaggag
aaccacgagctgctcgcggtccacggcatggggccggggcgcgtcgagcagtatggcgag
ggcttcctgcgcgtgatcaaaggcgagtga
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