Labilithrix luteola: AKJ09_08869
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Entry
AKJ09_08869 CDS
T04033
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
llu
Labilithrix luteola
Pathway
llu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKJ09_08869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llu03400
]
AKJ09_08869
DNA repair and recombination proteins [BR:
llu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKJ09_08869
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AKJ09_08869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
DnaJ_CXXCXGXG
AAA_16
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKV02206
UniProt:
A0A0K1Q8V5
LinkDB
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Position
complement(9324944..9327544)
Genome browser
AA seq
866 aa
AA seq
DB search
MRVRGARQNNLKNVDVEIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPYARR
LIDQAGVPDVDAIEGLPPAVALQQQRGTPGARSSVGSVTTLSSLVRMLYSRTGTYPPKQP
MLFAEDFSPNTVQGACSTCHGLGRVYAVTEQSMVPDDSLTIRERAIASWPPAWQGQNLRD
ILVTLGFDVDKPWRDLPKKDRDWILFTEEQPTVPVYAGLTPKDTRAALARKDPPSYQGTF
TGARRYVLHTFANTQSALMKKRVSQFMVGSDCPTCHGKRLKPEALSVTFGGLDIADFSQL
SLERLAELLRPVARGNLPSTGTEQRASVSKKAARAAIERRVASGGSAHEGAFDVRRTPNL
SEEKRLAAQRIATELLERLTALVDLGLGYLSLDRSTPTLSPGELQRLRLATQLSSQLFGV
VYVLDEPSAGLHPADGEALFTALERLKASGNSLFVVEHDVQMMRRADWLVDVGPAAGEHG
GRIVYSGPPAGLANVKASTTARYLFRASTNEPRREPRRPAGWLRLSGITRNNLRRVDAAF
PLGCFTTVTGVSGSGKSSLVSQALPELVRKHLGQPEEEAEEDEPNPLLSVEQATEGTITG
GLEKIRRLVRVDQRPIGRTPRSNLATYTGLFDHVRKLFATTPGARKRRYSAGRFSFNVAE
GRCPTCEGEGFVSVELLFLPSVYAPCSTCHGTRYNPQTLEIRWNDLHIAEVLDLTVDAAR
DLFAGEPQIERALTALRDIGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGDTLYVLD
EPTTGLHPADVERLLIQLQGLVAGGNTVVVVEHEMGVAAQSDWVIDVGPGAGDAGGRIVA
SGVPDVIARSAASRTAPYLKRQTAAR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgcgcggcgcacgccagaacaacctgaagaacgtcgacgtcgaaattcctcgc
gacgcgctggtcgtcttcaccggcgtgtcgggatccggcaagtcgtcgctcgccttcggc
acgctctacgcggaagctcaacgacgctatctcgagtcggtggcgccctatgcgcgacgt
ctgatcgaccaggccggcgttccggacgtcgacgcgatcgagggattgccgcccgccgta
gcgctccagcagcagcgaggaaccccgggggcgcgctcgtccgtcgggagcgtcaccacg
ctctcgagcctcgtccgaatgctctattcgcgcacgggcacctatccgccgaagcagccc
atgctcttcgcggaggacttctcaccgaacaccgtccagggtgcgtgttcgacgtgtcac
ggcctcggacgcgtttatgccgtcaccgagcaatcgatggtgcccgacgactcgctcacg
attcgcgagcgcgcgatcgcgtcgtggccgccggcatggcaaggacagaacctccgcgac
atcctcgtgacgctcggcttcgacgtcgacaagccgtggcgagacctgcccaagaaggat
cgcgactggatcctcttcaccgaagagcagcctaccgttcccgtctacgcgggcctgacg
ccgaaggacacgcgggcggcgctcgcacgcaaggatccgccgagctaccagggcaccttc
accggcgcgcgccgctacgtgctccacacgttcgccaacacgcagagcgcgctgatgaag
aagcgcgtttcccagttcatggtgggcagtgattgcccaacgtgccacggcaaacgcctc
aagccggaggcgctctcggtgacgttcggcggcctcgacatcgccgacttctcccagctc
tcgctcgagcggttggcggagctcttgcgccccgtcgctcgaggcaacctgcccagtacg
ggcacggagcaaagagcgtccgtctccaagaaagccgcgcgagccgccatcgaacgccgc
gtggcaagcggtggttcggcccacgaaggcgccttcgacgtgcggcgcacaccgaacctc
tccgaggagaagcgacttgcggcgcagcgcatcgccaccgagctactcgagcgtctgacc
gcgctcgtcgaccttggactcggttatctctcgctcgatcgcagcacgcccacgctatcg
cccggcgagctccagcgattgcgcttggccacgcagctctcctcgcaactcttcggcgtc
gtgtacgtcctcgacgaaccttcggcaggactccacccggccgacggcgaggcgctcttc
accgcgctcgagcgtctcaaggcaagcggcaattcgctcttcgtcgtcgagcacgacgtg
cagatgatgcggcgcgcagattggctggtcgacgtggggcccgcagcgggtgagcacggt
gggcgaatcgtctacagcggcccgcctgcgggactcgcgaacgtgaaggcgtcgacgacg
gcacgctatctctttcgcgcgagcacgaacgagcctcgacgcgaacctcgacggcccgcg
ggctggctacgactgtccggcatcacgcggaacaacctgcgccgcgtcgatgccgcgttt
cctctcggctgcttcacgacggtcacgggcgtgtcgggctcgggcaagtcgagcctcgtc
agtcaggctttgccggagctcgttcgcaagcacctcgggcagcccgaagaggaagcggag
gaggacgagccgaatcctcttttgtccgtagagcaggccacggagggaacgatcacgggc
ggtctcgagaagatccggcgcctggtacgcgtcgatcagagaccgatcggccggacgccg
cgttccaacctcgcgacgtacacgggcctgttcgatcacgttcgcaagctcttcgccacc
acccccggagcccgaaagcgccgttacagcgcgggacgcttttcgttcaacgtcgccgaa
ggtcgctgcccgacctgcgagggcgaaggcttcgtcagcgtcgagctcctgttccttccg
agtgtctacgcgccttgctccacgtgccacggcacccgctacaatccgcagacgctcgag
atccgctggaacgatctccatatcgccgaggtcctcgacctcaccgtcgacgcggctcgc
gatctcttcgccggcgaaccacagatcgagcgcgcgctcactgcgctccgcgacatcggc
ctcggttacctgcgactaggtcagccggccaccgagctctccggcggcgaggcgcagcgg
atcaagctcgccaccgagctccagcgttcgcagcgcggtgacacgctttacgtgctcgac
gaacccacgacgggtctgcaccctgccgacgtcgagcgcctgctgattcagttgcagggc
ctcgtcgcgggcggcaatacggtggtcgtcgtcgagcacgaaatgggcgtcgccgcacag
agcgactgggtcatcgacgtgggccctggagccggcgacgccggcggccgcatcgtcgct
tcgggcgtccccgacgtcatcgcgcgcagcgccgcgagccgaaccgcgccctacttgaaa
cgccagacggcggcgcgctga
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