Labilithrix luteola: AKJ09_09252
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Entry
AKJ09_09252 CDS
T04033
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
llu
Labilithrix luteola
Pathway
llu02020
Two-component system
llu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AKJ09_09252
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKJ09_09252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llu03021
]
AKJ09_09252
Transcription machinery [BR:
llu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ09_09252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_31
Hydrolase
Phage_CII
HTH_21
LacI
Motif
Other DBs
NCBI-ProteinID:
AKV02589
UniProt:
A0A0K1QA20
LinkDB
All DBs
Position
9736927..9738450
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AA seq
507 aa
AA seq
DB search
MEIKQQLKLSQQLVMTPQLQQAIRLLQLSRLELIEEIRKECDANPVLADEEFEPRPRSNT
DSSGAEVIGTAPEQGEARIDRLDERRRAETGSAEKTDTKQVNEIDWEQFLENRTLQQPLP
ASRGGFEELPPIEQNLTKAASLVDHLRWQLQMSDFTESEKRFAELILGNLDDNGFLDLKG
VERPDGTRTPDLTIEELAEEAGLDPEDAPEVLRMMQEWDPVGVCSRDLRECLLVQAEVFG
SLDLDVTIIDKHLHNLEKHNYQAIARDLKVPVEEVYESVKEIQKLESRPARNFSETDEKQ
IAITPDVYVVKDSEKWVVTDNDRGVQRLYINEALTKQLLKDPSAKEFIGEKLRNAQWLIR
AIEQRRKTIIRVTECIVEKQREFFERGVAHLKPMILRDVAEAVGMHESTISRVTTNKYVH
TPQGLFELKYFFNSSIRRVAEEDIASESVKQAIKKIIEGEDKQNPLSDQAIVEILAKQDG
IQIARRTVAKYREMLGILASSKRKKLF
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaacagcagctaaagctctcccagcagcttgtgatgacgccgcagcttcag
caggcgatccgcctgcttcagctgtcccgcctcgagctcatcgaggaaatccgtaaggaa
tgcgacgccaatccggtgctcgcggacgaggaattcgagcctcggccccgttcgaacacc
gattcttcgggcgcggaggtcatcggcaccgctcccgaacagggcgaagcccggattgac
cgcctcgacgagcgccggcgcgccgagaccggcagcgctgaaaagaccgacaccaagcag
gtcaacgagatcgattgggagcagttcctcgagaaccgcaccctccagcagcccctgccc
gccagccgtggtggtttcgaggagctgccgccgatcgagcagaacctgacgaaggcggcc
tcgctcgtcgaccacctgcggtggcagctgcagatgagcgactttacggagtcagagaag
cgctttgccgagctcatcctcggcaacctcgacgacaacggcttcctcgacctcaagggt
gtcgaacgaccggacggcacgcgaacgccggaccttaccatcgaagagctcgccgaagag
gcagggctcgatccggaggatgccccggaggtcctgcgcatgatgcaggagtgggatccc
gtgggcgtctgctcgcgtgacctacgggagtgcttgctcgtccaggccgaggtcttcgga
tcgctcgacctcgacgtgaccatcatcgacaagcacctgcacaacctcgagaagcacaac
taccaggccatcgcgcgtgacctgaaggtgccggtcgaagaggtctacgagtcggtcaag
gagatccagaagctcgaaagccgccccgcccgtaatttcagcgagacggacgaaaagcag
atcgccatcacgcccgacgtctacgtcgtgaaggactcggagaagtgggtcgtcaccgac
aacgaccgcggcgtgcagcgcctctacatcaacgaggcgctgaccaagcagctcctcaag
gatccgagcgccaaggagttcatcggcgagaagctccgcaacgcgcagtggctcattcgc
gcgatcgagcagcgccggaagacgatcattcgcgtcaccgagtgcatcgtcgagaagcag
cgcgagttcttcgagcgcggcgttgctcacctcaagccgatgatcctccgcgacgttgcc
gaagccgtcggcatgcacgagtcgacgatctcgcgcgtgacgaccaacaagtacgtgcac
acgccccagggcctcttcgagctgaaatacttcttcaactcgtcgatccgccgcgtggcc
gaggaagacatcgcctcggagagcgttaagcaagcgatcaagaagatcatcgagggcgag
gacaagcagaacccgctcagcgaccaggccatcgtcgagatcctggccaagcaggacggg
attcagattgcccgccgcaccgtcgcgaaataccgcgaaatgctgggtatccttgcgtcg
agcaagcgcaagaagctcttctaa
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