Labilithrix luteola: AKJ09_10065
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Entry
AKJ09_10065 CDS
T04033
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
llu
Labilithrix luteola
Pathway
llu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKJ09_10065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llu03021
]
AKJ09_10065
Transcription machinery [BR:
llu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ09_10065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AKV03402
UniProt:
A0A0K1QCL5
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All DBs
Position
10618060..10619211
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AA seq
383 aa
AA seq
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MYLTEMAASTVLGTEQETELARNIANAEKAILDALSRAPAGIQALKRLGNEVASGSVDIR
DVLLNPDQDGLDLVAVRERVQNLLATADTKDDSARAALVDALADIRLDGEIIEGVVGAIR
AAAELEGDGPDAAALGVIERARRDLKRNKERFVVGNLRLVVLFARKYLNRGVPLLDLIQE
GNLGLMRAADKFDHRRGFRFSTYAAWWIKQALQRALLDRTLRLPVHVADDRRRVGKVRAA
FQAQHLREPTADEISNLSGLARERVLNILSLPAQPASLDTPMGEDGDASLGDIVASPVAP
PDHTVAQRALSFQLAGMLDALTPREQQVVRMRFGIGGTREHTLEEVGRALSLTRERIRQI
ERAALDKLRARSERVQLRSYLDT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaccgagatggctgcgagcacggtgctcggcaccgagcaggaaaccgagctc
gcccggaacatcgccaacgccgagaaagccattctcgacgccctctcccgcgctccggcc
gggattcaggccctcaagcgcctcggtaacgaggtagcgagcgggtccgtcgacatccgt
gacgtcctcctgaaccccgatcaggacgggctcgatctcgtcgccgttcgcgagcgcgtc
cagaacctgctcgcgaccgccgacaccaaggacgattccgcgcgcgcagccctcgtcgac
gccttggcggacatccgcctcgatggggagattatcgagggcgtggtcggcgccatccgc
gcagccgccgagctcgaaggcgacggaccggacgccgcagcgctcggcgtcatcgagcgc
gcgcgtcgcgatctcaagcgcaacaaggagcgcttcgtcgtaggcaacctgcgcctcgtc
gtgctctttgcgcgcaaatacctcaaccgcggcgttccgctcctggacctcattcaggag
ggcaacctcggactcatgcgcgcggcggacaaattcgaccaccgtcgaggcttccgcttc
agcacctacgcggcgtggtggatcaagcaagctcttcagcgagccctgctcgatcgaacg
ctccgcctgcccgtgcacgtcgccgacgatcggcgtcgcgtcggaaaggtgcgcgccgcg
ttccaggcgcagcaccttcgcgagcctacggccgacgagatctcgaacctctcgggcctc
gcacgcgagcgtgttctgaacatcctgtccctccccgcccagcccgcgagcctcgacacc
ccgatgggtgaagacggcgacgcgagcctcggggacatcgtcgcctcccccgttgctccg
ccggatcataccgttgcgcagcgcgcgctcagcttccagctggcgggcatgctcgacgcg
ctcacacctcgcgagcagcaggtcgtgcggatgcgcttcggcatcggaggcacgcgcgag
cacacgctcgaagaggtcggtcgcgcgctgtcgctcacgcgcgaacgaatccgtcagatc
gagcgtgccgcactcgacaagctccgcgcccgttcggaacgcgtgcagcttcgcagctac
ctcgacacctga
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