Leucobacter luti: K1X41_01340
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Entry
K1X41_01340 CDS
T08001
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
llut
Leucobacter luti
Brite
KEGG Orthology (KO) [BR:
llut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llut03016
]
K1X41_01340
Enzymes [BR:
llut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K1X41_01340
Transfer RNA biogenesis [BR:
llut03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K1X41_01340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYM76164
LinkDB
All DBs
Position
complement(291527..292714)
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AA seq
395 aa
AA seq
DB search
MVEQSELDTQWSLITDDAGLAHAAALLADATGPIGVDAERASGFTYGAEAYLVQVYRRGA
GPFLFDPIEITSFAPLAAALDGEEWILHAASQDIPCLDELGLHPDRLFDTELAARLLGYD
RVGLGAIVEQLLGIHLEKAHSAADWSQRPLPESWLEYAALDVALLPDLRDAIADDLDAQG
KREYAVQEFEAVRTRPQKIKSPEPWRKLSGAHVLKTPRSLALARELWEARDALARERDIA
PGRLIPDSSVVAAAAANPRSKGDLARIPNFKGRASRTEIDRWWKAILVGKTTGNLPGSKP
RDPDAIPHHRGWGQRNPEAAERLVAARAAVEAEAERQGIPIENLLTPDHLRRLVWRPPAD
RSAESIALRLKELGAREWQLGIVAPILAAVFVDLR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaacagtcagaactcgacacccagtggtcgctgatcaccgacgatgctggtctt
gctcacgctgcagccctgctcgccgacgctaccgggccaattggtgtcgacgctgagcgc
gcttcagggttcacttacggcgccgaggcgtatctcgtgcaggtgtatcgacgcggcgcc
ggtccattcctcttcgatccaatcgaaatcacgagtttcgctccactcgccgcagcgttg
gatggtgaagagtggattctgcatgccgccagccaggacattccctgccttgatgaactc
ggactgcatcctgaccgcctcttcgacaccgagctcgcggcacgcttgctcggctacgac
cgagtggggctcggtgcgatcgtggagcagctgctcgggatccacctggagaaggctcac
tcggcggccgactggtcgcagcgcccgcttcccgagtcgtggcttgagtacgccgcgctt
gatgttgcgctgctcccggatctccgcgacgcgatcgcggatgacctcgatgcccaaggc
aagcgcgagtacgcggtgcaggagtttgaagcggtgcgcactcggccgcaaaagatcaag
agcccggagccgtggcgaaagctctccggtgcgcatgtattgaagacaccgcgaagcctg
gcgctcgcgcgcgagctctgggaagcgcgcgacgcgcttgcacgagaacgggatatcgcg
ccagggcgactcatcccagactcgtcggtggttgcggcggccgcggcaaatccacgttcc
aagggtgatctcgcacggattccgaattttaaggggcgcgcgagccgcactgagatcgac
cggtggtggaaagcgatcctcgtcggaaagaccaccggaaatttgcctggatcgaagccc
cgggatcctgacgcgatccctcaccatcgcggctggggccagcggaacccggaggcagcc
gagcggctggtcgccgcgcgtgccgcggtggaggccgaggcggagcgtcaggggatcccc
attgagaatctgctgactccggatcatctgcgccgtctggtgtggcgtccacccgctgat
cgctcggcagagagcatcgcactccgtctcaaagagctcggagcccgtgagtggcagctt
ggaatagttgcaccaatacttgcggctgtttttgtagatctgcgataa
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