Leucobacter luti: K1X41_14355
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Entry
K1X41_14355 CDS
T08001
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
llut
Leucobacter luti
Pathway
llut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X41_14355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llut03019
]
K1X41_14355
03009 Ribosome biogenesis [BR:
llut03009
]
K1X41_14355
Enzymes [BR:
llut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1X41_14355
Messenger RNA biogenesis [BR:
llut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1X41_14355
Ribosome biogenesis [BR:
llut03009
]
Prokaryotic type
rRNA helicases
K1X41_14355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QYM75765
LinkDB
All DBs
Position
3199331..3201442
Genome browser
AA seq
703 aa
AA seq
DB search
MTSSETAASNAGENATPVEPEGERITFAELGLAPDVLRAVTEVGYETPSAIQAATIPVLL
EGRDVVGLAQTGTGKTAAFALPILSRIEPGKGVPQALVLAPTRELALQVCEAFESYAAHL
PGVHLLPIYGGQAYGQQLSALRRGVDIVVGTPGRIMDHLKRGSLDLTQIKYLVLDEADEM
LKMGFAEDVETILADTPTDKQVALFSATMPAQIRRISQKHLRDPQEIKIAGKTQTSSTIT
QRYNVVSYTQKLDALTRILEVEPFDGLIVFTRTRGDSEQVAEKLRARGYSAAAINGDIAQ
NMRERTVQALKDGTLDILVATDVAARGLDVERISHVINYDLPIDTESYVHRIGRTGRAGR
KGDAISFVTPRERRLLTAIEKATKQPLTQMPLPGVDEVNATRLSRFDDAITTALGETARV
DRFRDIIAHYVRNHDVPETDVAAALAVVAQGDTPLLLTEDDDRKFERDRKQARAFLEEDP
RGGRDRPAREDRGPRERRSDLKMYRIEVGHRQKINPGQIIGAIANEGGLTRDDFGRIQVR
DDFSLVELPAQLPGGALDKLSQTRIGGKLIELTEDRGGSGSRGGSSYDRGGDRGGDRGGR
GGYDRGGDRGGRGGYDRGGDRGGRGGYSNDRGGNDRGGYGGDRGGDRGGRGGYGNDRGGS
SYGNDRGNGGGFSGGRSNGGGFSGGNSRDEGPNRSDGKRKPRW
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttctgagaccgccgcgtctaacgccggcgagaacgcaacccccgtagaaccc
gagggcgagcgcatcaccttcgccgagctgggcctcgcgcctgacgtgctccgcgctgtg
accgaagttggctacgaaacgccgtcggccattcaggccgcgacgatccctgttctgctc
gaaggccgcgacgtcgtcggcctcgcacagaccggaaccggcaaaaccgcagccttcgcg
cttcctatcctttcccgtatcgagcccggcaagggcgtcccgcaggccctcgtgctcgca
ccgactcgtgagctcgcgctccaggtctgcgaagcattcgagagctacgcagcgcacctc
cccggagtgcacctcctccccatctacggtggtcaggcctacggccagcagctttccgcg
ctgcgccgtggcgttgacatcgtggtgggcaccccaggccgcatcatggaccacctcaag
cgcggctcgcttgacctgacgcagatcaagtaccttgtgcttgatgaagctgatgagatg
ctcaagatgggcttcgccgaggacgtagagacgatcctcgccgacaccccgaccgacaag
caggtcgccctcttttccgcaacgatgccggcacagatccggcgaatctcgcagaagcac
ctgcgcgatccgcaggaaatcaagattgctggcaagacgcagacgagttcgacgatcacg
cagcgttacaacgtggtctcctacacgcagaagctcgatgcgctcacccgtatcctcgag
gtcgagccgtttgatggcctgatcgtcttcacgcgtacccgaggcgattccgagcaggtc
gctgagaagctccgcgctcgcggatactcggcagctgccattaacggcgacatcgcgcag
aacatgcgcgagcgcaccgttcaggcattgaaagacggcacgctggacatcctggtcgcc
actgacgttgcggcccgtggcctcgatgttgagcgcatcagccacgtcatcaactatgac
ttgccgatcgacaccgagtcgtacgtgcaccgcatcggccgcacgggccgcgcgggtcgt
aagggcgacgcgattagcttcgtgacgccgcgcgaacgtcgtctgcttacggcgatcgag
aaggcaacaaagcagccgctcacgcagatgccgcttcccggggtcgacgaggtcaacgcg
actcgtctgtcccgcttcgatgatgcgattaccaccgcgctgggggagaccgcccgcgtc
gatcgtttccgcgacatcattgctcactacgtgcgcaaccacgatgtgcccgagacggac
gttgctgcggcacttgccgtagtcgcgcagggggacaccccactgctgctcaccgaagac
gacgaccgcaagttcgagcgcgatcgcaagcaggctcgtgccttcctcgaagaggatccg
cgcggcggccgtgatcgtccggcacgtgaggatcgcggaccgcgcgagcgtcgcagcgat
ctcaagatgtaccgcatcgaggttggccaccgccagaagatcaaccccggccagatcatt
ggcgccatcgccaatgagggtgggctgactcgcgacgatttcggtcgcatccaggtgcgc
gacgacttctcgctggttgagctcccggcgcagcttcctggcggggccctcgacaagctc
tcgcagacgcggatcggcggcaagctgatcgagctcactgaggatcgtggtggctccggc
tcacgcggtggctccagctatgaccgcggcggcgatcgtggcggcgaccgcggaggccgt
ggcggttatgaccgcggtggcgatcgtggtggccgtggcggctatgaccgcggcggcgat
cgtggtggccgtggtggctacagcaacgaccgcggcggcaacgatcgcggtggctatggc
ggagaccgcggtggcgatcgtggtggccgtggcggctacggcaacgatcgcggcggcagc
tcctacggcaacgaccgtggcaatggcggagggttctccggcggccgtagcaacggtggc
ggattctcgggcggcaatagccgtgatgagggcccgaaccgttcggacggcaagcgcaag
ccccgctggtaa
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