Lutra lutra (Eurasian river otter): 125078128
Help
Entry
125078128 CDS
T08100
Name
(RefSeq) tripartite motif-containing protein 6-like isoform X1
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125078128
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125078128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_6
zf-Nse
zf-RING_10
Bacillus_HBL
CFAP58_CC
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
125078128
NCBI-ProteinID:
XP_047546176
LinkDB
All DBs
Position
10:60603968..60619615
Genome browser
AA seq
487 aa
AA seq
DB search
MTSALLVDIRDEVTCPICLELLTEPLSIDCGHSFCQACIMGNSTESVMGQDGESNCPVCQ
TSYQPGDLRPNRHLANIADRLREVVLGPGMQLEGILCVHHGEKLQLFCKEDGKLICWLCE
RSQEHRGHHTVLMEEVVHEFQEKFQESLRKLRLEQQEAERLAAVIIRKRTSWKNQMEPER
HRIQTEFNKLRSILDKEEQRQLKKLEEEERKGLSILEEAENELVRQSQSLRELISDLELR
CQGSAVDLLQDVSDVMKRSEFWTLKKPEALPTKLKSMFRVPDLKRMLRVFRELTDVQSYW
VDVTLNPHTANLNLVMSKNRRQVRFVGAKLSGSYLEEHYDCGILGSQHFSSGKHYWEVDV
TKKTDWILGVCCNSVDSTYCFNQFTNNRNVYSRYQPQSGYWVIGLHHKHEYRAYEESSTS
LLLSMMVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLSPYFNPCNCVVPM
TLRRPSP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacctcagcgctcctggtggacatacgagatgaagtaacctgccccatctgcctggag
ctcctgacagagcccctgagcatagactgtggccacagcttctgccaggcttgcatcatg
gggaatagcacagaatcggtgatgggccaagatggggaaagcaattgtcctgtgtgccag
accagctaccagcctggggacctgcggccaaatcgacacctggccaacatagcggacagg
ctccgagaggtggtgttgggccccgggatgcagctggaggggattctctgtgtgcaccat
ggagagaaactccagctgttctgtaaggaggatgggaagctcatttgctggctttgtgag
cggtctcaggagcaccgaggtcaccacacggtgcttatggaggaggttgtccacgagttc
caggagaagttccaggagtctctgaggaagctgaggctagagcagcaggaagctgagaga
ctggccgcggttatcataaggaagaggacatcctggaagaatcagatggaacccgagaga
cacaggatccagacagagtttaataagttgagaagcatcctagacaaagaggagcagcga
cagttgaaaaagctggaggaggaagagaggaaggggctgagtattttagaagaagctgag
aatgagctggtccggcagagccagtcactgagggagctcatctctgatctggagcttcgg
tgtcaggggtcagcggtggacctgctgcaggatgtgagtgatgtcatgaaaagaagtgag
ttctggaccctaaagaagccagaagctctccctactaagctgaagagtatgtttcgagtt
ccagatctgaaaagaatgctgcgagtgttcagagaactgacggatgtccagagctattgg
gtggacgtgactctgaatccacacacagctaacttaaatcttgtcatgtctaaaaaccga
agacaggtgagatttgtgggtgccaagctgtctgggtcttacctggaagagcattatgac
tgtggtatcctgggctctcagcacttctcctctgggaaacattactgggaggtggatgtg
accaagaagactgactggatcctaggggtatgctgtaattcagttgactctacatactgt
ttcaaccagtttacgaacaatcggaatgtttactccagataccaacctcagagtggctac
tgggtgatcgggctgcatcataaacatgaatatagagcctatgaggagtcttccacttcc
ctgctcctctccatgatggtgccccctcgccgtgttggggttttcttagactatgaggcc
ggcactgtctccttttataatgtcacgaaccatggctttcccatctacaccttctctaaa
tattactttcctaccaccctttctccatattttaatccttgcaactgtgtagtcccaatg
accctgcgtcggccaagcccttga
DBGET
integrated database retrieval system
