Lutra lutra (Eurasian river otter): 125078234
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Entry
125078234 CDS
T08100
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125078234
03036 Chromosome and associated proteins [BR:
llv03036
]
125078234
Transcription factors [BR:
llv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125078234
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125078234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
125078234
NCBI-ProteinID:
XP_047546452
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All DBs
Position
10:complement(101550148..101560267)
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AA seq
712 aa
AA seq
DB search
MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEKKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEE
TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVE
VKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWD
RKAEDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKVEKKSTPSRSSSSKSSSRQLS
ESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacactggagttcaacgacgtctatcaggaggtgaaaggctccatgaacgat
ggccggctgaggttgagccgccagggtatcattttcaagaatagtaagacgggcaaagtg
gacaatatccaggccggcgagttgactgaaggcatctggcgccgtgtcgccctgggccac
ggacttaaactgcttacgaagaatggccatgtctacaagtatgatggcttccgagaatcg
gagtttgagaaactctcggatttctttaaaactcactatcgccttgagctgatggagaag
gacctctgtgtgaagggctggaactggggaacggtgaagtttggtgggcagctgctttcc
tttgacattggtgaccagcctgtctttgagatacccctcagcaatgtgtcccagtgtacc
accggcaagaacgaggtgacactggaattccaccagaacgatgacgcagaggtgtccctc
atggaggtgcgcttctatgtgccgcccactcaggaggatggtgtggacccagttgaggcc
tttgcccagaatgtgctgtctaaggcggatgtgatccaggctactggagacgccatctgc
atcttccgggagctgcagtgtctgactccccgaggccgttacgacattcggatctacccc
acctttctgcaccttcacggcaagaccttcgactacaagatcccctataccacggtgctg
cgtctctttctgctgccccacaaagaccagcgccagatgttctttgtgatcagtctagat
ccccccatcaagcagggccaaacccgttaccacttccttatcctcctcttctccaaggat
gaggacatctcgttgactctcaacatgaatgaggaagaggtggagaagcgctttgagggc
cggctcactaagaacatgtcaggatccctgtacgagatggttagccgggtcatgaaagcg
ctggtcaaccgcaagatcacagtgccaggcaacttccaaggacactcaggagctcagtgc
atcacctgctcctacaaggcaagctcaggactgctttaccctctggagcggggcttcatc
tacgtccacaagccacctgtgcacatccgcttcgatgagatctcctttgtcaactttgcc
cgtggtaccaccactactcgttcctttgactttgaaattgagaccaagcagggcacccag
tataccttcagtagcattgagagggaggagtatgggaagctgtttgattttgtcaatgcc
aaaaaactcaacatcaaaaaccgaggactcaaagagaaaaaagagggcatgaacccaagc
tacgatgagtatgccgactctgatgaggaccagcacgatgcttacttggagcggatgaag
gaagagggcaagatccgggaagagaatgccaacgacagcagcgatgactcaggagaagaa
accgatgagtcattcaatccaggtgaagaggaggaagacgtggcagaggagtttgacagc
aacgcctcagctagctcctctagtaatgagggtgacagtgaccgggatgaaaagaaacgg
aagcagcttaaaaaggccaagatggccaaggaccgaaaaagccgcaagaagcctgtggag
gtgaagaagggcaaagaccccaatgcccctaagaggccgatgtctgcctacatgctgtgg
ctcaatgctagccgagagaagatcaagtcagaccatcccggcatcagtatcacggatctt
tccaagaaggcaggcgagatctggaagggaatgtccaaagagaagaaagaggagtgggat
cggaaggctgaggatgccaggagggaatatgaaaaagccatgaaagaatatgaagggggc
cggggtgagtcttctaagagggacaagtcaaagaagaagaagaaggtaaaggtgaaggtg
gaaaagaaatcaacaccctcaaggagctcatcatccaagtcctcatcaaggcagctaagt
gagagcttcaagagcaaggaatttgtgtccagtgatgagagctcttctggagagaacaag
agcaaaaagaagagaaggcggagtgaggactctgaagaagaggagttggccagtactccc
cccagctcagaagactcggcatcaggatctgatgagtag
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