Lutra lutra (Eurasian river otter): 125078240
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Entry
125078240 CDS
T08100
Name
(RefSeq) interferon regulatory factor 7-like isoform X1
KO
K09447
interferon regulatory factor 7
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04620
Toll-like receptor signaling pathway
llv04621
NOD-like receptor signaling pathway
llv04622
RIG-I-like receptor signaling pathway
llv04623
Cytosolic DNA-sensing pathway
llv05160
Hepatitis C
llv05161
Hepatitis B
llv05162
Measles
llv05164
Influenza A
llv05167
Kaposi sarcoma-associated herpesvirus infection
llv05168
Herpes simplex virus 1 infection
llv05169
Epstein-Barr virus infection
llv05203
Viral carcinogenesis
llv05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125078240
04621 NOD-like receptor signaling pathway
125078240
04622 RIG-I-like receptor signaling pathway
125078240
04623 Cytosolic DNA-sensing pathway
125078240
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125078240
09172 Infectious disease: viral
05161 Hepatitis B
125078240
05160 Hepatitis C
125078240
05164 Influenza A
125078240
05162 Measles
125078240
05168 Herpes simplex virus 1 infection
125078240
05167 Kaposi sarcoma-associated herpesvirus infection
125078240
05169 Epstein-Barr virus infection
125078240
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125078240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125078240
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125078240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125078240
NCBI-ProteinID:
XP_047546480
LinkDB
All DBs
Position
10:114260037..114263645
Genome browser
AA seq
499 aa
AA seq
DB search
MAAAADRRPPRLLFGDWLLGEVSSGRYEGLRWLDAARTRFRVPWKHFARKDLGEADSRIF
KAWAVARGRWPPRSSGGRGGGDQLALEGTLRAGWKTNFRCALHSTQRFVMLQDNSGDPAD
PHKVFALSFEPEERGAGTQQGETALDDAPPWRGGLPGPCLAGDAAERPGLGLSPELGAPS
PPFGAADSAGDLLLQALKQSCLEAHLLEAAWVGDPVPPEAPGLELRNTEPSLPRAGDTAP
VHQAQETDAGLAPVLEPWQPPPDVAPCPGLAAEPGSQGEPSLRALDVTIMYKGRTVLQEV
MWRPSFVFLYGPPSPATAATEPQHVAFPSPAELPDQKQLHYTEKLLQHVAPGLQLELRGC
RLWARRLGKCKVYWEVGGPLGSASPSTPPRLLQRNQDTPIFDFSTFFREMMEFRARRRPG
SPHYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRAHLECVQREGVSSLDSSSLGLCLSS
SNSLYEDLERFLMEVQQPA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccgctgacaggaggcccccgcgcctgctcttcggagactggcttctgggg
gaggtcagcagcggccgctacgagggcctgcggtggctggacgcggcccgcacgcgcttc
cgcgtgccctggaagcacttcgcgcggaaggacctgggagaggctgactctcgcatcttc
aaggcctgggcagtggcccgcggcaggtggccgcccaggagcagcggcggcaggggcgga
ggcgaccagctggccctggagggcacgctccgggccggctggaaaaccaactttcgctgt
gcgctgcacagcacccagcggtttgtgatgctgcaggacaactcaggggaccccgctgac
ccgcacaaagtgttcgcgctcagcttcgagcctgaggagagaggtgcgggcactcagcag
ggggagacggccctggacgacgccccgccctggaggggtgggctcccaggaccatgcctg
gcaggagacgctgctgagaggccagggcttgggctgagtcctgagctcggcgccccaagc
cccccttttggcgcagccgacagtgctggggacctcttgctccaggctctgaagcagagc
tgcctggaagcccacctgctggaagctgcatgggtgggggacccggtgcccccagaggct
cccggcctggagctccggaacacagagccgtccctgccaagggcaggagacacggccccc
gtgcaccaggcgcaggagacagatgcaggcctggccccggtcctggagccctggcagcct
ccaccagatgtggcgccttgccccgggctggctgctgagcctggatcacagggagagccc
agcctgagggccctggatgtgaccattatgtacaagggccgcacagtgctgcaggaggtg
atgtggcgtccaagcttcgtgttcctctacggacccccaagcccagccaccgcggccact
gagccccagcacgtggccttcccgagcccagccgagctccctgaccagaagcagctgcac
tacaccgagaagctgctgcagcacgtggccccgggactgcagctggagctccggggctgt
aggctgtgggcccggcgcctgggcaaatgcaaggtctactgggaggtgggagggccccta
ggctctgccagcccctccacacccccccgcctgctgcaaaggaaccaagacacccccatc
ttcgacttcagcaccttcttccgagagatgatggagttccgggctcgccggcgtccaggc
tccccgcactacaccatctacctgggtttcgggcaggacctgtcagctgggaggcccaag
gagaagagcctggtcctagtgaagctggagccgtggctgtgccgggcgcacctggagtgc
gtgcagcgagaaggggtgtcctccctggacagcagcagccttggcctctgcctgtccagc
tccaacagcctctacgaggacctggagcgcttcctcatggaggtacagcagcccgcctga
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