Lutra lutra (Eurasian river otter): 125078375
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Entry
125078375 CDS
T08100
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04270
Vascular smooth muscle contraction
llv04360
Axon guidance
llv04611
Platelet activation
llv04625
C-type lectin receptor signaling pathway
llv04810
Regulation of actin cytoskeleton
llv05135
Yersinia infection
llv05152
Tuberculosis
llv05163
Human cytomegalovirus infection
llv05200
Pathways in cancer
llv05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125078375
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
125078375
04625 C-type lectin receptor signaling pathway
125078375
09153 Circulatory system
04270 Vascular smooth muscle contraction
125078375
09158 Development and regeneration
04360 Axon guidance
125078375
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125078375
05205 Proteoglycans in cancer
125078375
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
125078375
09171 Infectious disease: bacterial
05135 Yersinia infection
125078375
05152 Tuberculosis
125078375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125078375
Membrane trafficking [BR:
llv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125078375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
125078375
NCBI-ProteinID:
XP_047546881
LinkDB
All DBs
Position
10:16184286..16330091
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVVGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSRPLGDPLPVSEVEADPGDGLGRIDYSSGDTS
RPSSDSADSPKSALKERICLEENPEKSEAIQDPDTQSLIGSPSPRVAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAEREKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRQDNSAIGRAMELQKQRHPKHLSTPSSVSPEPPDPAKLRQSGLAGEGTDVGY
LPANSMSSVATGATLAQEGGKENDTGSKQVGETPASGDCVDSTPRTPNTVFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLIWFSGPGEDKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTELPVEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSAK
PIPLPQSPPCEGDNDEETAPKLKVEHHSISVPGLQSPDRDLGLESPLISSKPQSHSLGTS
GKSEVDDLFVAERQFAKEQHADGTLQEAGASYQIPGPDPHLPASEERWALDALRNLGLLK
QLLVQQLGLTEKSAQEDWSHFPRYRTASSGVQTDGGAQNSENSKAYPPGEGHVPFRTGTG
DAAPCYSPRTSAESSTPRDSVVLAFQDSQASNILVMDHMLRTPEMPPAEPEGSLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEDVNLRISGNYLILDGYEAVQESSTDEGLASSLPPPP
TTGTPTTDSARPQQHSPQRAHSDGAASPFSPEFLVQQRWGAMEDSCFEIQSPPSCADSQS
QIMEYIRKIEADLEHLKKVEESYSMLCQRLAGSALTDKHSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
gggagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtgca
tcacatgattttgatcctacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgctgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggggtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccgcctgggtcgccccagattccactcgccgattctgaa
gtagagccatcagtcgttggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaacatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggctg
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttacatcctccaggcctttaggtgacccactgccagtcagtgag
gtggaagccgatcctggtgatggactaggcagaattgactatagcagtggagacacttct
cggcccagtagtgacagcgcagatagtcccaagagtgccctgaaggagaggatttgtcta
gaggaaaacccagagaagagtgaagcgattcaggaccctgatactcagtcactcattggg
agtccctctccccgtgtagcgcctcatattattggagcagaggatgatgatttcggcact
gaacatgaacagatcaatgggcagtgcagctgtttccagagcatcgaactgctgaagtct
cgccctgctcacctggctgttttcttgcaccacgtggtctcgcagtttgaccccgctaca
ctgctctgttatctctattcagacctatataagcagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcaattcttcctggatcgatccgcacacctgaaagtttctgtg
cctgatgaaatatcggtagatcttgaaaaaagaagacctgagcttatacccgaggatcta
catcgccactatatccaaactatgcaggaaagagtccacccagaagttcagaggcacttg
gaagattttcggcagaagcgtagcatggggctgaccttggctgaaagcgaactgactaaa
cttgacgcggagcgggagaaggaccgggtaactttggagaaggaacgggcatgtgcggag
cagatcgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagataag
agttcaacaatgcagtatgttatccttatgtacatgaagcatttgggggtaaaagtgaaa
gaacctcgaaatttggagcacaagcggggtcggattggattccttccaaaaatcaagcag
agtatgaagaaagatcgagaaggcgaagaaaaagggaagcgcagaggattccccagcatc
ctgggacccccaaggagaccaagccgtcaggacaacagtgcaattggcagagccatggag
ctgcagaaacagcggcacccgaagcacttatccacaccctcttctgtgagtcctgagcct
ccggaccctgctaagttgcgccagagtgggttagcaggtgaaggaacagatgtcggatac
ctgccagccaattccatgtcctctgtggcaacaggggccactcttgcccaggaaggaggg
aaagagaacgatacaggatcaaaacaagttggagaaacaccagcgtctggagactgtgtg
gatagcacccctcggactcccaataccgtctttgattttccacctcctcccctagaccaa
gtgcaggaggaggaatgggaagtagaaagggtgactgaacatgggacaccaaagcccttt
cgaaagtttgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacggatccacccaattggcaacagcttgttagtcgagaagtgttactggga
ctaaagccttctgagatcaaaagacaggaagtaattaatgaactgttctacactgaaaga
gctcatgttcgaacactgaaggttcttgatcaagtattctaccagcgagtgtctagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttggaagatattcttcaa
cttcatattggattgaatgagcaaatgaaggctgttcgaaagaggaatgagacctcagtt
attgatcagattggggaagacttgctgatctggttcagtggaccaggggaggacaagttg
aagcacgctgctgctaccttttgcagtaaccaaccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacctttgtgcaagatgctgagagtaatcctctg
tgtcgtcgtctgcagctgaaggatatcattcctacacaaatgcagaggcttaccaagtac
cctcttctgttggataatattgccaaatacacagaattgccagtggaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaaacagcgtttagaagactatcagcgtcgtctggatacctctaatctgaag
ttgtcagagtacccaaacgtggaagagctcaggaatttggatttaacaaaaaggaagatg
attcatgaaggaccattggtctggaaggtgaatcgagataaaactattgatctgtacaca
ttgctgctggaagacattcttgtattgttacagaagcaggatgacagactggtgttaaga
tgtcatagcaagattctggcatctaccgctgacagcaaacacacattcagccctgtcatt
aagttgaatacagtgctggtccgacaagtggcaacagataacaaagctttatttgtcatc
tccatgtcagacaatggagcccaaatttatgagctggtggcacagacggtttccgaaaag
actgtctggcaagacctaatctgtcggatggccgcctcagtgaaggagcagtccgcaaag
cccatcccgttgccacagtccccgccttgcgaaggtgacaacgatgaagaaacagctccc
aaattaaaagtggaacatcacagcatttcggtccctggtctgcagagtccagacagagat
ttgggattagagtctcccttaatatcatccaaacctcagtcgcattcactgggtacctct
gggaaatccgaggtagacgatctctttgtggctgagagacagtttgctaaggagcagcac
gcagacgggactctgcaggaagctggagcaagttaccaaatcccgggcccagacccacac
ttgcctgcctcagaagaacggtgggcactggatgcactaaggaatttgggcttgctgaag
cagctgctcgtacaacagctgggtttgaccgagaagagcgcccaggaagactggtcacat
ttcccaagatacaggacagcgtcttcaggggtgcagacagacggtggagcccagaactct
gagaacagtaaggcctatcctcctggtgaaggacacgtgccctttagaactggaactggt
gacgctgccccttgttacagtccacggacttcagctgaatcttcgactccacgggattca
gtggttctggcattccaagatagccaggcaagtaacattttagtaatggaccacatgctt
aggaccccggagatgcctcctgcagagcccgaagggagtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacacagtgacgataatccatcagaaggtgatggagcagtt
aagaaggaagaggatgttaatttgcgcatctcaggaaactatctgattctcgatggctat
gaagcagtgcaggagagctccacggatgaggggcttgcctcctcgcttcccccgccgccc
acgacaggcacccccaccacagactctgcccgcccgcagcagcactcgccccagcgtgcc
cattccgacggggcagcttcaccattcagcccggaattcctggtccagcagcgctgggga
gccatggaggattcctgttttgagatccagagtcccccctcttgtgcagactcacagagc
cagatcatggagtacattcgtaagatcgaggctgaccttgaacacttaaagaaggtggag
gaaagttacagcatgctttgccaaaggctggctggatcagccctcacagacaagcactca
gataaaagttag
DBGET
integrated database retrieval system
