Lutra lutra (Eurasian river otter): 125078487
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Entry
125078487 CDS
T08100
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125078487
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125078487
2.7.7.52 RNA uridylyltransferase
125078487
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125078487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
zf-met
RRM_PARP14_3
RRM_7
TUTase
Zf-C2H2_ZNF451_C
RL
DUF4632
tRNA_NucTransf2
Motif
Other DBs
NCBI-GeneID:
125078487
NCBI-ProteinID:
XP_047547234
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All DBs
Position
10:complement(105636952..105648770)
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AA seq
870 aa
AA seq
DB search
MAAVDSDVQSLPRGGFRCCLCHVTTANRPSLDAHLGGRKHRHLVELRAARKAQGLRSVFV
SGFPRDVDSAQLTQYFQAFGPVASVVMDKDKGVFAIVEMGDIGTREAVLSQPQHTLGGHR
LRVRPREQKEFQSPASRSPKGAAPDSDQLAKALAEAPDVGAQMVKLVGLRELSEAERQLR
SLVVALMQEVFTEFFPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLEESQPAPKAPESPS
LDSALASPLDPQALGCTLASPPDSQPPSPQDSEALDFETPSSSLAPQTPDSALASETLAS
PQSLPPASPLQEDLGEGDLGKALELAEALRGEKTEGVAMLELVGSILRGCVPGVYRVQTV
PTARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWTQGRG
LSGSGPLLSNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDASR
LEPSTNKEPLSSLLAQFFSCVSCWDLRGSLLSLREGQALPVAGGLPSDRWEGLRLGPMNL
QDPFDLSHNVAANVTSRVAGRLQISCRAAANYCRSLQYQRRSSRGRDWGLLPLLQPSSPS
SLLSATPIPLPPAPFAQLTAALAQVLREALGCHIEQGTKRLRSDRGGPESPQGGTSKRLK
LDGQEKSCEEGQEEQRGCVGDHSEDGVEEMVVEAGEMVQDWGQSPGQPGEPPQMPGKQLA
PGEEGQSGHAALAEQEPKGLEAAGDGSRGETEKGVSLCSVSWRCALWHRVWQGRRRARRR
LQQQTKERGGGGDGTAEWLAVEAQVTQELRGLSSAAQRPEAEPLLTFVASASQADQTLTV
TPVQDSQGLFPDLHHFLQVFLPQALRNLLK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtggattcggatgtccaatcgttgccccgtgggggtttccgctgctgcctc
tgccacgttactacagccaaccgacccagcctagatgcccatttggggggccggaagcac
cggcacctggtagaactacgagctgcccgaaaggcccagggactccgaagtgtgtttgtc
agtggctttccccgggatgtggattctgctcagctcactcagtacttccaggcatttgga
cccgtggccagtgttgtcatggacaaggacaagggagtgtttgctattgtggagatgggg
gacattgggacccgggaagctgtcttgtcgcagccccagcacaccctaggaggacatcgc
ctgcgggtccgaccacgggagcagaaagagttccagagcccggcctccagatcccccaaa
ggagcagcccctgacagtgaccagctggccaaagcactagctgaggccccggatgtgggg
gcacaaatggtgaagctcgtggggctgagggagttgtctgaggctgagcgacagcttcgg
agcctcgtggtagccctgatgcaagaggtcttcacagagttctttcccggctgtgtggtc
catccttttggctcttccataaacagttttgatgtccatggctgtgatcttgacctcttc
ttggatctgggtgacttggaagagtcccagccagccccaaaggcccctgagtctccatct
ttggactcagcccttgcatcaccactggatcctcaagccctgggctgtaccctggcttct
cctccagactcacagcctccttctccccaagactcagaagccctggattttgaaactcct
tcctcttcactggcaccccagactccggactctgctttggcctctgagacccttgcctct
ccccagtccctgcctccagcctcaccactgcaggaagacctgggagagggggacctgggg
aaggccctggaactagcagaggccctgaggggggagaaaacagagggagtagccatgctg
gagttggtgggatccattcttcggggctgtgtccctggagtgtaccgagtccaaactgtg
cccactgcccgacgccctgtggtcaagttttgccatcggccttcaggtcttcacggtgac
gtctccctcagtaaccggctggccctgcataactctcgcttcctgagtctctgctcggag
ttggatgggcgagttcggcccctggtgtacaccctgcgctgctggactcagggtcgaggg
ctgtcaggaagtggccccctcctcagtaactacgccctgaccttgctcgtgatttatttc
cttcagaccagggaccctcctgtgttgcccactgtgtcccagctcacccagaaagcaggg
gagggtgagcaggtggaggttgatggctgggactgtagtttccccagggatgcctcaaga
ctggagcccagcaccaataaggagcccctcagttctctgctagcccagttcttctcctgc
gtctcttgttgggatcttcgtggctcactgctgtccctgcgggagggtcaggcactgcct
gtggcagggggcctgccctctgatcgctgggagggtctgcgccttggccccatgaatctc
caggacccctttgacctgagtcacaatgtggcagccaatgtgaccagccgggtagctggg
cgcctacagatcagctgccgggcggcggccaattactgccggagcctccagtaccagcgc
cgctcctcccggggccgtgactgggggctgctcccccttctgcagcccagctcccctagt
tccttgctgtctgcaacacccatccccttaccccctgcccccttcgcccagctcactgct
gccctggcccaggtgttaagggaagcgttaggatgccatatagaacagggaaccaagaga
ctgcggtcagacagggggggccctgagtctcctcagggagggacaagcaaaaggttgaaa
ctagatggacaggaaaaaagctgtgaggaggggcaggaggagcagcggggatgtgtcggg
gatcacagtgaagacggggtggaggaaatggttgtagaggctggagagatggtacaggac
tgggggcagagccctgggcagccaggggagccaccccagatgcccggaaagcagctcgcc
cctggagaagaggggcagtcgggccatgcagcactggcagagcaggagcccaagggactc
gaggcagctggagacgggtctcggggtgagacagagaagggggtgtcactctgctctgtg
agctggcgctgtgccctgtggcaccgagtgtggcaggggcggcggcgggcccggcgacgc
ttgcagcagcaaaccaaggagagaggcggaggtggagacggcaccgcggagtggctggcc
gtggaggcccaggtcacccaggagctgagaggactgagcagtgctgcacagcggccagag
gcagagccgctcctgacctttgtggcctctgcctcccaggctgaccagactctcaccgtg
accccagtccaggattctcaaggcctgttccctgacctccatcatttcttacaggttttc
ctccctcaagcacttcggaacctcctgaagtga
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