Lutra lutra (Eurasian river otter): 125078683
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Entry
125078683 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
llv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125078683
04120 Ubiquitin mediated proteolysis
125078683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125078683
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125078683
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125078683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125078683
NCBI-ProteinID:
XP_047547658
LinkDB
All DBs
Position
10:complement(107503709..107511294)
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AA seq
611 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGTLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPAPPEPAEQGPQPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAGAPPSTGAAALPRPSGA
ATTTGAAAAPAPAPGSAPAPEGGPAPGFPFPPPWMGVPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPAASVSPTEET
APAVVTAASPTSIPSSETTTPSPGASPPAPEPEKPPAPESLGTEELPEDGEPDAAELRRR
RLQKLESPVAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcaccctcctgctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatttcctggctcttccattgccgc
attgtctccctcatgttcctcctgggtaccctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgcggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgactatggtcctcaccatcttcatcaagtacgtcctgcactccgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgttcacaggc
ttcatcaaggttttgctgtacatggctttcatgactatcatgatcaaggtgcacaccttc
cctctctttgccatccggcccatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtcccgccgcgccatccgtaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcgatggacaacgtgtgcatcatctgccgagaagagatggtgacg
ggggccaagagactgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgcatggacgttctccgggcatcactgccgacc
cagtcacctgcgcccccggagcctgctgagcaggggccacagccagccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctcccttccccccaggc
atgttcccgctgtggcccccgatgggccccttcccacctgtcccacctccccccagctca
ggagaggctggggcccctccgtccaccggtgcagcagcccttcctcggcccagtggagcc
gccacaaccacaggggctgctgcggccccggccccagcccctggctccgcccccgccccc
gaaggcggccccgccccaggcttccccttccctcccccctggatgggcgtgccgctgcct
ccgccttttgccttcccccccatgcccgtgccccccgcgggctttgccgggctgacgccg
gaggagctgcgggctctggaaggccacgagcggcagcacctggaggcccgactgcagagc
ctgcgcaacatccacacgctgctggacgccgcgatgctgcagatcaaccagtacctcacc
gtgctcgcctccctgggacccccccgacctgctgcctcagtcagccccactgaggagact
gccccggcggtggtcactgctgcctcccccaccagcatccccagctctgagaccaccacc
ccctcccctggagcctccccaccagcccctgagcctgaaaagcctccagctcctgagtca
ctgggcacggaggagctgcctgaggacggggagcctgatgcagcagagctccgccgccgc
cgcctgcagaagctggagtcccctgttgcccactga
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