Lutra lutra (Eurasian river otter): 125078957
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Entry
125078957 CDS
T08100
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125078957
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125078957
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125078957
NCBI-ProteinID:
XP_047548198
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Position
10:7174391..7253306
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AA seq
883 aa
AA seq
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MAAQRRPQEYGVLCIQEYRKNSKVESSTRNSFMGLKDHLGHDLGHLYAESTDPHSSAPVP
WSMVEKPTMDQGHSGKEEKDVSGGNASSGDSDGSAHSDNEAERLSVSVEPCLLTKTHRQL
CRSPCLEPRVLTRSDLLRDFPPAEAPAACREAAQPPDAVREYQTKLEFALKLGYSEEQVQ
LVLHKLGTDALINDILGELVKLGNKSDAEPAVSAMPSAPRDSSSLESQRSDSPMQEPLAD
DGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPD
ALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLA
NEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGK
KCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTTAKTANEGGLVKSNSVPCSTKADSTA
DVKRGAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPATSTAKPQSAPSLSN
GLPSGVHFPPQDQRPQGQYPPLMMATKNHGTPMPYEQYPKCDSPVDIGYYSMLNAYSNLS
ISGPRSPERRFSLDTDYRISSVASDCSSEGSMSCGSSDSYVGYNDRSYVSSPDPQLEESL
KCQHMHPHSRLNSQPFLQTFHDPLARVQSYSHEEPKYHHKPPLPHLAVHLQHPAAGARSS
CPGDYPSPPGSAHSKAPHLGRSLVATRLDSISDSRLYDSSPSRPRKPYSHQDGLASWERQ
SYGLDAYGYRQTYSLPDNPTQPGYEQFPFQSLPEPPEPAWRVPYCAVPPDPPRYQDNREK
IYINLCNIFPPDLVRTVMKRNPHVTDAQQLAAAILVEKSQLGY
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcagaggagaccgcaagaatacggggtgctttgcattcaggaatacagaaaa
aatagcaaagtggagtcaagtacccgtaacagcttcatgggcttgaaggatcatctgggg
catgacctcggccacctttatgcggagagcactgacccacactcaagtgcacctgtgccg
tggtcgatggtagagaagccgacaatggatcaagggcactccgggaaggaggagaaagac
gtgtcgggagggaacgcgagctccggcgactcggacggaagcgcacattctgacaacgag
gccgaacgactgagcgtttcggtggagccgtgcttgttgaccaagactcacagacagctg
tgccggtcgccctgcttggagccccgcgtgctcacacgcagcgacctgctgcgagacttt
ccgcccgcggaggcgccggcggcctgcagggaggcggcgcagccccccgacgcggtgcgg
gagtaccagaccaagctggagttcgcgctgaagctgggctactcggaggagcaggtgcag
ctcgtgctccacaaactcgggaccgatgctttgatcaacgacatcctgggagagctggtc
aagctgggaaacaagagcgacgccgagccggccgtgagcgcgatgcccagcgcgccgcgg
gactcgtcctccctggagtcccagcgctcggactcgccgatgcaggagccgctcgcggac
gacggcgagaacctgaggccggtggtcatcgacggcagcaacgtggccatgagccatgga
aacaaagaagtattttcctgccggggaatcaaattggcagtggactggtttttggaaaga
ggccacaaagatgttacagtgtttgttccggcttggagaaaagagcagtctcgacccgat
gctctcattacagatcaggaaatcctgcggaagttagagaaggagaaaatcctggtgttc
acgccgtcccgacgcgtgcagggccgacgcgtggtgtgctacgatgaccggttcatcgtg
aagctggcttttgagtcggacggaatcatcgtgtccaacgacaactacagggacctggcc
aacgagaaacccgagtggaagaagttcatagatgagcgactgttgatgtactccttcgtc
aacgacaagttcatgccccctgatgaccctcttggcagacacggccccagcctggataat
tttctgaggaagaaacctatcgttcctgaacacaaaaagcagccttgtccatacgggaag
aagtgcacctacggccacaagtgcaaatactaccatcccgagcggggcagccagccgcag
cggtcggtggccgacgagcttcgggccatgtctagaaacaccacggccaaaacggccaac
gagggagggctggtgaagagcaacagtgtgccctgcagcacgaaagcggacagcactgcc
gacgtcaagcggggtgctccaaagaggcagtcggaccccagcataaggacccaagtctac
caagacctcgaggaaaagcttcccaccaaaaacaaattggaaaccaggtctgtaccttct
ttagtcagtatcccggctacttccaccgcaaaaccccaaagcgctccgtctctaagcaat
ggccttccatctggagttcacttcccacctcaggatcaaagaccacagggacaatatcct
ccgctgatgatggcaaccaaaaatcacggaacgccgatgccttacgaacagtatcccaag
tgcgactcgcccgtcgacatcggatactactccatgttgaacgcgtactccaacctgagc
atctcaggcccacgcagtcccgaaaggcgtttctccctggacacagattacaggatcagc
tccgtcgcctctgactgcagtagcgaagggagcatgagctgtgggagcagtgactcttac
gtggggtacaacgaccggtcctacgtcagctctcccgaccctcagctggaagagagtctc
aagtgtcaacacatgcacccgcacagccgccttaactcccagcccttcctgcagactttc
cacgaccccctagctagagtgcaaagttacagtcacgaagaaccaaagtaccatcacaag
cctcctctgccccacctggccgtgcacctgcagcaccccgccgcgggcgcgcgctccagc
tgccccggcgactacccctccccgcccggctccgcgcactccaaggcgccgcacctgggc
cgctcgctggtggccacgcggctggacagcatctcggactcgcggctgtacgacagctct
ccgtcccgacccaggaagccttactcccaccaggacgggctggcgagctgggagcggcag
agctacggcctggacgcctacggctaccggcagacctactccctgcccgacaaccccacg
cagccgggctacgagcagttccccttccagagcctccccgagcccccggagcccgcgtgg
cgcgtcccctactgcgcggtgccgccggaccccccgcggtaccaggacaaccgagagaag
atctacatcaacctgtgcaacatcttccccccggacctcgtgcggacggtcatgaagcgg
aacccgcacgtgacagacgcccagcagctggccgccgccatcctcgtggagaagtcgcag
ctgggctactga
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