KEGG   Lutra lutra (Eurasian river otter): 125079189
Entry
125079189         CDS       T08100                                 
Name
(RefSeq) nucleoporin Nup43-like
  KO
K14305  nuclear pore complex protein Nup43
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03013  Nucleocytoplasmic transport
llv05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125079189
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125079189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125079189
   03036 Chromosome and associated proteins [BR:llv03036]
    125079189
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125079189
Chromosome and associated proteins [BR:llv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    125079189
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EIPR1 WD40 Beta-prop_EML_2 Beta-prop_EML WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_RIG_2nd WD_LRWD1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_SPT8 Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 125079189
NCBI-ProteinID: XP_047548607
LinkDB
Position
10:complement(6124997..6126154)
AA seq 380 aa
MEDIYAKFVSQKISKTRWRLVPPGSLQTADTFAAGSWDNEENYVSLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVSQQWTAAHY
HTGPGSPSCGSAPCTGIVCSNPEIVTVGEDGRINLFRADHKEAVRTIDNADSSILHAVTF
LRTPEILTVNSIGQLKIWDFRKQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTDVPEKSS
LFNQGGRNSTFLSHSISNQASVHQSLISSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLG
PCLVCGTDSEAIYVTRQLFS
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggaggacatttatgctaagtttgtgtctcagaaaatcagcaaaacccgctggcgactg
gtacctccaggaagcctgcagaccgcggataccttcgctgcgggctcttgggacaatgag
gaaaattatgtttcactgtggtctattggagattttgggaacttggactctgatggaggg
tttgaaggagaccatcagttattgtgtgatatcagacaccatggcgatgtaatggattta
cagttttttgaccaggaaagaattgtagcagcttcatcaacaggatgtgtaacagttttc
cttcaccatccaaataaccagactctgtcagtcagccagcagtggacagccgctcactac
cacacaggtccaggcagtccttcctgtggcagtgcaccatgcacaggtattgtgtgcagc
aaccccgaaattgtcaccgttggagaagatggtcggataaatctcttcagagccgatcac
aaggaggcggtgagaaccatagacaatgcagatagcagtatactccatgctgtaaccttc
cttcgaactcctgagattcttacagtaaattcaattgggcagttaaaaatatgggatttc
agaaaacaaggaaatgagccctctcagatattatcactgactggtgaccgagtacccctc
cactgtgttgatagacatcccaaccagcagcatgttgtagctactggtggccaggacgga
atgctgagtatttgggatgttagacaaggcactatgcctgtgtctctgctgaaggctcat
gaagctgaaatgtgggaagttcactttcacccgtccaacccagatcatctatttacttgt
tctgaggacggatccctctggcattgggatgcctccacagacgtacctgaaaaatcatca
ctgtttaaccaaggaggaagaaatagtacttttttgtctcacagcattagtaaccaggct
agtgttcaccagtctcttataagctcctggctcagcactgatcccgcaaaagaccgtatt
gaaatcacaagcttgcttcccagcaggaccttgtctgtgaacagtttggatgttttaggt
ccttgtcttgtttgtggaactgattcagaagcaatttatgttactagacaacttttttca
tga

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