Lutra lutra (Eurasian river otter): 125079189
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Entry
125079189 CDS
T08100
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125079189
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125079189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125079189
03036 Chromosome and associated proteins [BR:
llv03036
]
125079189
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125079189
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125079189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40
Beta-prop_EML_2
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
125079189
NCBI-ProteinID:
XP_047548607
LinkDB
All DBs
Position
10:complement(6124997..6126154)
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AA seq
380 aa
AA seq
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MEDIYAKFVSQKISKTRWRLVPPGSLQTADTFAAGSWDNEENYVSLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVSQQWTAAHY
HTGPGSPSCGSAPCTGIVCSNPEIVTVGEDGRINLFRADHKEAVRTIDNADSSILHAVTF
LRTPEILTVNSIGQLKIWDFRKQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTDVPEKSS
LFNQGGRNSTFLSHSISNQASVHQSLISSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLG
PCLVCGTDSEAIYVTRQLFS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatttatgctaagtttgtgtctcagaaaatcagcaaaacccgctggcgactg
gtacctccaggaagcctgcagaccgcggataccttcgctgcgggctcttgggacaatgag
gaaaattatgtttcactgtggtctattggagattttgggaacttggactctgatggaggg
tttgaaggagaccatcagttattgtgtgatatcagacaccatggcgatgtaatggattta
cagttttttgaccaggaaagaattgtagcagcttcatcaacaggatgtgtaacagttttc
cttcaccatccaaataaccagactctgtcagtcagccagcagtggacagccgctcactac
cacacaggtccaggcagtccttcctgtggcagtgcaccatgcacaggtattgtgtgcagc
aaccccgaaattgtcaccgttggagaagatggtcggataaatctcttcagagccgatcac
aaggaggcggtgagaaccatagacaatgcagatagcagtatactccatgctgtaaccttc
cttcgaactcctgagattcttacagtaaattcaattgggcagttaaaaatatgggatttc
agaaaacaaggaaatgagccctctcagatattatcactgactggtgaccgagtacccctc
cactgtgttgatagacatcccaaccagcagcatgttgtagctactggtggccaggacgga
atgctgagtatttgggatgttagacaaggcactatgcctgtgtctctgctgaaggctcat
gaagctgaaatgtgggaagttcactttcacccgtccaacccagatcatctatttacttgt
tctgaggacggatccctctggcattgggatgcctccacagacgtacctgaaaaatcatca
ctgtttaaccaaggaggaagaaatagtacttttttgtctcacagcattagtaaccaggct
agtgttcaccagtctcttataagctcctggctcagcactgatcccgcaaaagaccgtatt
gaaatcacaagcttgcttcccagcaggaccttgtctgtgaacagtttggatgttttaggt
ccttgtcttgtttgtggaactgattcagaagcaatttatgttactagacaacttttttca
tga
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