Lutra lutra (Eurasian river otter): 125079202
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Entry
125079202 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125079202
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125079202
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
DUF3618
Motif
Other DBs
NCBI-GeneID:
125079202
NCBI-ProteinID:
XP_047548621
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Position
10:58000770..58041938
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AA seq
1261 aa
AA seq
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MAPVKISHVVSFSSQDPKYPVENLLNPDSPRGPWLSSPQDKSGQLKVELQLERAVPIGYI
DVGNCGSAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADLKQGKNRSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRQQSFGLAFLRVCSSLDSLDDPVGGPSAPESSRLRQGSDAQE
SSPSPWLANPSIRRTFFPDPQTSTKEISELKNILKQLQPGPLGRSARMVLSAARRFPPTS
MASRRTSPSEPGPSQPASTELRPEEQNSENHVGRTKRRKVQACRPLSSSNSRPNQRGMAK
AGQREYHRRQAQSSGVQDTALCPICAGSFSVEVLPQHAATCGEISPPQPASPSSSPSSSQ
SALRISAVWYSPVPLVSRPQPTXTEIVNKKLRFPPPLLAAIQEGRLGLVQQLLESGVEAS
GSGPGGPLRNMEEAEDRSWREALNLAIQLGHKAITDVLLANVKFDFRQIHKVLLVAVDTK
QPAAVRRLLAWLEWEKGPKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQL
LMEQGHTIARPHPVSCASLECSNARRYDLLKFSLSRINTYRGMASRAHLSLASEDAMLAA
FQLSRELRRLARKEPEFKPEYIALESLSQDYGFELLGMCQNQSEVTAVLNDQDEDNKTEP
EAESLGQAFEEGIPNLARLRLAINYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKL
FVAFLIFLTMPFLCLGYWLAPKSRLGHLLKIPVLKFLLHSASYLWFLLFLLGESLAMETQ
LSTXECQSVWETSLHMVWITGFLWFECKEVWIEGLRSYFLDWWNFLDMVILSLYLAAFAL
RLLLAGLAHTHCRDAPSGAACHYFTTAERSEWHTEDPQFLAEVLFAVTSMLSFTRLAYIL
PAHESLGTLQISIGKMIDDMIRCVLFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFMGRALYGIFTIVMVIVLLNMFIAMITNSFQKIE
DDADVEWKFARSKLYLSYFREGLMLPVPFNILPSPKALFYLLRRIFHIICCCCSCHQTKK
PDYPPIPTFANPQAGAGPGEGEQGSYRLRVIKALVQRYIERAQREFEETRADLGNRLTEL
TKTVSRLQSEVAGVQRTLAEGGTRWLPGGASILSRYITRVRNSFQNLGPPIPETPELTVP
GIEGTQVPSEPGLQDVGGARMPASGESDPSSPARVLVHREQESEAEGDMPWEENLGVKGG
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtaaagattagtcacgtggtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagacagtccgagaggaccttggctcagcagtcctcaggac
aagagtgggcaactgaaagtagaactccagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctctgctttcctacaaattgatgtgggccgttcttcctggtcc
ctggatagaccttttgtcaccctgctccctgcaaccatgctaatgtccctagccgactta
aagcaggggaaaaaccgctcaggcgtccgcatgtttaaagatgatgatttcctggcgcca
gcctcaggtgagtcatgggatcgacttcgcctgacctgctcccaacccttcacacgtcag
cagtcttttggcctggccttcctccgggtgtgttcctccctggactccttagatgaccct
gtgggaggtccctcggcccctgagagctctaggctgaggcagggctctgatgctcaggag
tctagtcccagcccctggctggctaatccttccatccggaggacattcttcccagatccc
caaacgagcaccaaggaaatttcagagcttaagaatatcctaaagcagctgcagccaggg
cctttgggccgttcagcccgaatggtgctttcagctgcccggaggttcccccccacaagc
atggcaagcaggagaaccagcccttcagaaccaggtcctagtcagccagccagcacagag
ctcagaccagaggagcagaactcagagaatcatgtgggcaggacaaagagacggaaagta
caagcctgcaggcctttatccagctcgaactcacggcccaaccagcgggggatggcaaaa
gcagggcagagagaataccaccgacgccaggcccaaagcagtggggtccaggatactgcc
ctgtgccccatttgtgcaggctccttcagtgttgaggttcttccccagcatgctgccacc
tgtggagagatctccccacctcagccagcctctccctcctcatcaccatcttcgtcacag
tccgcactgagaatttctgctgtgtggtactcaccagttcctctggtctccaggccacag
cccacctgaacggagatcgtgaacaagaagctgaggttcccacctccactcctggccgcc
atccaggaggggcgcctgggcctagtgcagcagttgctggagtcaggagtcgaagcatca
ggcagtgggccaggtgggcccctgaggaacatggaggaggctgaggaccgctcctggagg
gaagctctcaatctggccatccagctgggccacaaggccatcactgatgtgctgttggcc
aatgtcaagtttgacttccggcagatccacaaggtcctgctggtggcagtggacacaaaa
cagccagccgcggtgcggcgcctgctggcctggctggaatgggagaagggccccaaagtg
gatactaggtccttttcactggccttctttgactcatcaatcgatggctcgcgctttgct
cctggtgtcactcccctcaccctggcctgccagaaggacctgtatgagatcgcccagctg
ctcatggagcagggccacaccattgcccggccccacccagtctcctgcgcctcccttgag
tgcagcaatgcccgccgctatgacttgctgaagttctccctgtcccgcatcaacacctac
cgcggcatggccagcagggcccacctctcgctggccagtgaggatgccatgctggctgcc
ttccagctcagccgggagctcagacgtcttgcacgcaaggaacccgagtttaagccagag
tacattgccctggagtcactgagccaggactacggctttgaactgctgggtatgtgccag
aaccagagcgaggtcactgcggtgctcaatgaccaggacgaggacaacaagactgaaccc
gaggctgagagcctgggccaggcctttgaggaaggcatccccaacctggcgaggcttcga
ctggccatcaactacaaccagaagcggtttgtagcacaccccatctgccagcaagtcctg
tcctccatctggtgtgggaacctggctggctggcgtggaagcaccaccatctggaagctc
tttgtcgccttcctcatcttcctcaccatgcccttcctctgccttggctactggctggcg
cccaagtcccggttgggccacctactgaagatcccagtgctgaagttcctgctgcactct
gcctcctacctgtggttcctcctcttcctgttaggcgagtccctggccatggagacacag
ctgagtaccnnagagtgccagagtgtctgggagacctccctacacatggtttggatcaca
ggtttcctgtggtttgagtgcaaggaggtgtggattgagggcctacgcagttacttcctg
gactggtggaacttcctggacatggtcatcctgtctctgtacctggcggccttcgcactg
cgcctcctcctggccgggcttgcccacacgcactgccgggatgcccccagtggggctgcc
tgccactatttcaccacagctgagagaagtgagtggcacacggaggacccccagttcttg
gcggaggtgctgtttgctgtcaccagcatgctcagcttcacccgcctggcctacattctg
ccggctcacgagtccctgggcactctgcagatttccattggcaagatgattgacgacatg
atccgatgtgtactgttcatgttcatcctcatgatcatcctgaccgcctttctctgtggt
ctcaacaacatctatgtgccctaccaggagacagaacggctgggcaatttcaacgagaca
ttccagtttctgttctggaccatgttcggcatggaggagcacagcgtcgtcgacatgcct
cagtttctggtgcctgaattcatgggccgggccctctatggcatctttaccatcgtcatg
gtcattgtgctgctaaacatgttcattgccatgattaccaactccttccagaagattgag
gatgacgcggatgtggagtggaagttcgctcgctccaagctctacctgtcctacttccga
gaaggcctgatgctacctgtgcccttcaacatcctgccctcccccaaggccctcttctac
cttctcaggagaattttccacatcatctgctgttgctgctcctgccaccaaaccaagaag
ccagactatccgccaatccccacctttgccaatccgcaggcaggggcagggcctggggaa
ggagagcaaggatcctatcgcctccgagtcatcaaggccctggtacaacgctacatagag
agagcccagcgggagtttgaggagacccgggcggacctgggcaacagactgacggagctg
accaagactgtgtctcgcctgcaaagtgaggtggctggtgtgcagcggaccctggcagag
ggagggacacgctggctacctggaggtgccagcatcctcagtcgctacatcacccgagtg
cgtaacagcttccagaatctgggccctcccatccctgaaactccagagctcacagtgcca
gggattgaggggacccaggtaccttcagaacctgggcttcaggatgttggaggggctagg
atgccagcttctggagagtctgacccttcctccccagctcgtgtgttagtgcacagggag
caggaatcagaggcggagggggacatgccctgggaggaaaatttgggggtcaaggggggg
tcctga
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