Lutra lutra (Eurasian river otter): 125079208
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Entry
125079208 CDS
T08100
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125079208
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125079208
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125079208
Cilium and associated proteins [BR:
llv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125079208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Cytochrom_D1
Beta-prop_IFT122_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
125079208
NCBI-ProteinID:
XP_047548630
LinkDB
All DBs
Position
1:202459537..202529021
Genome browser
AA seq
407 aa
AA seq
DB search
MAAPCPEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGH
KDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSFVT
ASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECV
HSYCEHGSFVTSVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS
GNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS
NFDVVDYGEVLKVHRPPAPLATSSGNLPEVDFPIPPGRGRSQESVQNQPQEPTSMPQALT
STLEHIVGQLDVLTQTVSILEQRLTLTEDRLKQCLENQQLIMQRTPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccttgccctgaggacccctcgctggagaggcattttaagggccaccgagat
gcagttacctctgtggacttcagtctcaacacgaagcagttggccagtggctccatggac
tcatgcctcatggtctggcacatgaagccccagtcacgcgcctaccgctttgcgggccac
aaggacgctgtcacctgtgtgaacttctccccttcgggacacctgctggcctcaggctcc
cgagacaagaccgtccggatctggatacccaatgtcaaaggcgagtctaccgtgtttcgt
gcccacacggccacagtgaggagtgtccacttctgcagcgatggccagtcttttgtgacg
gcctccgatgacaaaacggtgaaggtgtggtcaactcatcgccagaaattcctgttctcc
ctgagccagcacatcaactgggtccgctgtgccaggttctcccccgacgggaggctcatc
gtgtctgccagcgatgacaagactgtcaagctatgggacaagacgagccgggagtgtgtc
cactcttactgtgagcacggcagctttgtcacttccgtggacttccaccccagtggcaca
tgcatcgccgccgctggcatggacaacacggtgaaggtgtgggacgtgcggacgcaccgg
ctcttacagcactatcagctgcacagcgcagcggtgaatgccctctccttccacccgtcc
ggaaactacctgctcactgcctccagcgactcgaccctgaagattctggacctcatggag
ggccggctgctctacacactccacgggcatcagggcccagccaccactgttgccttttca
agaacgggggagtattttgcttctggaggttctgatgaacaagtgatggtctggaagagt
aactttgatgttgtggattatggagaagtcctaaaagtgcacaggcccccagccccactg
gccacatcctctgggaatctgccggaagtggatttccccatccctccaggcagaggcagg
agtcaggagtcggtgcagaaccagccccaggagcctaccagcatgccccaggcgctgacc
agcacgctggagcacatcgtgggccagctggacgtcctcacccagacggtctccatcctg
gagcagcggctgacgctgacggaagacaggctgaagcagtgcttggagaaccagcagcta
atcatgcagagaacaccaccgtga
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