Lutra lutra (Eurasian river otter): 125079470
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Entry
125079470 CDS
T08100
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125079470
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
llv01001
]
125079470
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125079470
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125079470
Protein kinases [BR:
llv01001
]
Serine/threonine kinases: Other
Other
125079470
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125079470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
125079470
NCBI-ProteinID:
XP_047549054
LinkDB
All DBs
Position
1:202963580..203048409
Genome browser
AA seq
1506 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLDSGHKTSSRVNSAAKPEEGGLRKNKAVKQGDRENFRKAKQKLGFSTSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHATVGASAPPAPAHPQPRPPQGSLALPGPSYAGNSPLIGRISFIR
ERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKN
PVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFR
PISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHL
EPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAH
IYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMN
ISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDL
IEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMD
TVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDD
NNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDI
ILSLNE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtgcatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggagcatggcagtgggcaggacatggtacctattcttaccaggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaagggagatccagacccatttgatgaccga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaacgcatatgtgatgacaagtcgagagccccct
ttaaacactgcagcttgcagactcctacttgacatcatgccagggctggaaactgctgtt
gtctttcaagaaaaggagggaattgttgagaatcttttcaaatgggcccgagaggctgat
cagccattgaggacatattctactggactgttaggaggtgctatggagaatcaagatatt
gctgccaactatagggatgagaattcacagctggtggcaatagtacttcgcagactgagg
gagctacagcttcaggaagtggctttgcggcaagaaagcaagcgtcccagcccacgaaaa
ctctcttctgaacctcttttgcctctggatgaagaagctgtggatatggactatggtgac
atggctgtagatgtagtggatggtgaacaagaggaagcctctggagacatggagatctcc
tttcatcttgattcaggccacaagaccagtagtagagtgaactcagctgccaaacccgaa
gaaggaggattgaggaaaaataaggcagtaaaacagggtgacagagagaattttaggaaa
gccaagcagaagttaggtttctcaacatctgatccagatcgcatgtttgttgagctgtct
aatagcagctggtcagaaatgtcaccttgggtgattggcaccaattataccctttatccc
atgactcctgctattgagcagcggcttattctccagtatctgacccccctaggagaatat
caggagttacttcccatattcatgcaacttggatcacgggaattgatgatgttctatatt
gacctgaaacagactaatgatgtcctgcttacgtttgaggcccttaagcaccttgcatct
ctcctgctccacaacaagtttgccacagaatttgttgcacatggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaagatgccatggaaagagtttgtatgcatccccacaatgttctttctgat
gtggtgaactataccctatggttaatggaatgttctcatgcctcagggtgctgccacgct
accatgtttttctcaatttgcttctccttccgggctgtgttggagctctttgaccgctat
gatggtcttcgtcgtctggtgaatttgatcagtactttggagattctaaatttggaagac
cagggtgcacttctgagcgatgatgaaatatttgctagccgccaaactgggaaacacacc
tgcatggccttgcgcaagtactttgaggcccacctggccattaaattggaacaagtgaag
cagtcacttcagaggactgagggtggcattcttgtgcatcctcaacctccatacaaggcg
tgttcatatactcatgaacagattgtggaaatgatggaatttttgatagagtatggccca
gcgcaactgtattgggaaccagctgaagtcttcctcaagctttcttgtgttcaactcttg
ttgcagcttatttctattgcctgtaattggaagacctattatgcaaggaatgacactgtg
cgctttgccttggatgtcctggctattctcactgttgtgccaaaaatccagctccagttg
gcagaatcagtggatgtgctggatgaggctggctccactgtctccactgtaggtatcagc
attattttgggagtggctgagggtgagttctttatccatgatgctgaaattcagaagtca
gcacttcagattatcatcaattgtgtgtgtggcccagataacagaatatccagtattggc
aaatttatctctggaactcctcggagaaagctgcctcagactcccaaaagcagcgagcac
accctggccaagatgtggaatgtggtccagtccaacaatggcatcaaggtgctcctgtcc
ttactgtccatcaagatgcccatcaccgatgcagaccagataagggctctggcctgcaag
gccctagtgggcctgtcacgcagtagcactgtccggcagatcatcagcaaactgcctctt
ttcagcagctgccagatccagcagctgatgaaggagcctgtcctgcaggacaagcgcagt
gaccatgtcaagttctgcaagtatgctgctgagctcattgaacgagtgtcaggaaagcca
cttctcattggcactgacgtgtctctggcacgactgcaaaaagcagatgttgttgcccaa
tcaaggatttccttccctgagaaagagctgcttctgttgatacgaaaccatctcatttct
aaagggcttggggagacagcaactgtgctgacgaaagaggctgacttgcccatgactgct
gcctctcattcatctgccttcaccccagtcactgctgctgcttctcctgtctctcttccc
cgaacccctcgcatcgccaatggcattgcaactcgactgggcagccatgccactgtgggt
gcctccgcccctcctgcccctgcccatcctcagccacggcccccccagggttcactagct
ttgcctggcccatcttatgcaggcaattcccccttgattggtaggatcagttttatcaga
gagaggccatcaccctgcaatggcaggaaaatcagagtgttgcggcagaagtcggaccat
ggcgcctacagccaaagcccagccataaaaaagcagttggacagacatcttccttcccca
cctacgctggacagtatcatcacagagtatcttagagagcagcatgctcgctgcaagaac
ccagttgccacctgcccacctttctctctctttactcctcatcagtgtcctgagccaaaa
cagaggcggcaagcgccaataaactttacctcaaggctaaaccgcagggcatcatttcca
aagtatggaggggtagatggcggatgctttgataggcaccttatctttagcaggttccgt
cctatttcagtgttcagggaagccaatgaggatgagagtggcttcacttgttgtgcattc
tcagcacgggagcggttcctgatgcttggcacctgcactgggcagttgaagctctataat
gtgtttagtggacaggaggaggccagctataattgtcacaactcggctatcacacatctt
gaaccttccagggatgggtccttactcctgacatctgctacttggagccagcctctgtct
gcactttggggaatgaaatcagtatttgatatgaagcattccttcacagaagatcactat
gttgagttcagtaagcattctcaggatcgggtcataggtacaaaaggagacattgcccac
atttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgccaac
aactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgatggc
gtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatgaat
atcagtggcgttttccatccgaatggactggaggttatcattaatactgagatttgggat
cttcgtactttccatcttttacacacagttcctgctctggatcagtgtcgtgtggtgttt
aaccacacggggacagtgatgtatggagctatgctgcaggcagatgatgaagatgactta
atagaagagaggatgaagagcccttttggatcatcttttcgaacatttaatgcaactgac
tacaaaccaatagcaactattgatgtgaaacggaacatctttgacctgtgtacagacacc
aaagactgctatcttgctgtcattgagaaccaaggcagcatggatgctctgaatatggac
acagtgtgcaggctgtatgaagtgggcaggcaacgtttggcagaggatgaggatgaagag
gaggaccaggaagaggaagaacaggaggaagaagatgatgatgaagatgatgacgacact
gatgacctagatgagcttgacactgaccagttgctggaggcggagttggaggaggatgac
aacaacgagaacgcaggggaggatggggacaatgacttttctccctctgatgaggagcta
gcaaaccttctagaggagggagaggatggggaggatgaagactctgatgcagacgaggaa
gtggaactgatcctgggggacacggacagctctgacaactctgatttggaagatgacatc
atcttatctctgaatgagtga
DBGET
integrated database retrieval system
