Lutra lutra (Eurasian river otter): 125079553
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Entry
125079553 CDS
T08100
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04068
FoxO signaling pathway
llv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125079553
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
125079553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125079553
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125079553
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125079553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
125079553
NCBI-ProteinID:
XP_047549192
LinkDB
All DBs
Position
10:88772002..88775133
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLASAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKKVSSEGKPSLE
QSPGVLDKADGQKPALSQPAVNVHPKFLKKSHDDGKERDKAIHQANLRHLCRICGKSFKT
DEHNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFRMDVKADVDSIHPTEFCHNCW
RIMYKKFSSVPCEVSFPRNATMEWHPHTPSCDICRAARQGLKRKSHQPNMQLSKKLKTAV
HRARRARRHKRRAQARINSKEVMQKISNCNHIHLSTKLLAVDFPAHFVKSISCQICEHIL
ADPVETTCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNKEISLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPMDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTVMKITIACGSEHVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRSFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLIFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTQETIEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYKNSGFTLS
SQAGVGDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcgcttctgccccagatgaaattcagcac
ccgcatattaaattttcagaatggaaatttaaactattcagggtgcgatcttttgaaaag
gcacctgaagaggctcaaaaagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccaggagtcctggacaaggctgatggtcagaagccagctctgagtcaaccagca
gtaaacgttcaccctaagtttctgaagaaatcccatgatgatgggaaagaaagagacaaa
gccatccaccaagccaaccttcgacatctctgccgtatctgtgggaaatcttttaaaacc
gatgagcacaatagaagatatccagtccatgggcccgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaggagagctacatcctggccagacctcattgccaaggtcttccgg
atggacgtgaaagcagatgttgactccatccaccccactgagttctgccataactgctgg
cgcatcatgtacaagaagtttagcagcgtcccatgtgaggtttccttcccaaggaatgca
accatggagtggcacccccacacgccatcctgtgacatctgccgtgctgcccgccaggga
ctcaagaggaagagccatcagccaaacatgcagctcagcaaaaaactcaaaaccgcggtt
caccgagctagaagagcccgtcggcacaagagaagagcccaggcaaggattaacagcaaa
gaagtgatgcagaagatttccaactgcaatcatatacatcttagtaccaagcttcttgct
gtggacttcccggcacactttgtgaaatccatctcctgccagatttgtgaacacatcctg
gctgatcccgtggagactacctgtaagcacgtgttttgcaggatctgcattctcagatgc
ctgaaagtcatgggcagctactgtccctgttgccaatatccctgcttccctaccgacctg
gagagcccagtgaagtcctttttgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaacaaggagatcagcttggaaaaatacaatcaccacgtgtcaagccacaag
gaatccaaagagacttttgtgcatattaacaaggggggtcggccccgccagcatctcctg
tccttgacccgaagggctcagaagcaccgcctgagggagctcaagctccaagtcaaggct
ttcgcggacaaagaagaaggtggagatgtgaaatcggtgtgtctgaccttgttcctgctg
gcgctgagggccaggaatgagcacaggcaggcggatgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtctgcctggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcaccgggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtcctcctgccgggctaccaccccttt
gagtggcagccgcctctgaagaacgtgtcctccagcacagacgtgggcattattgacggc
ctgtcgggtctgtcctcctctgtggacgattaccccatggacaccattgcgaagcggttc
cgctacgattcggctttggtgtctgctctgatggacatggaggaagacatcctggaaggc
atgagagcccaagaccttgatgactacctcaacggccccttcaccgttgtggtaaaggag
tcttgcgatggaatgggagacgtgagcgagaagcatgggagtgggcccgtggttccagaa
aaggccgttcggttttcgttcacggtcatgaaaattacaatagcatgtggctccgaacat
gtgaaggtgtttgaagaagtcaaacccaactccgaactgtgctgtaagcccctgtgtctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagccctctcattgct
gaaagggaggccatgaagagcagccaattaatgctcgagatgggaggcatccttcggagt
ttcaagttcatcttcaggggcaccggctacgatgagaaactcgtccgggaagtcgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgacgccacccgcctagaagcg
tctcaaaatctcatcttccactccatcaccagaagccactccgagaacctggagcgctat
gaggtctggcgttctaacccgtaccacgagtcggtggaagagctgcgggaccgggtgaaa
ggggtctcatcgaaacctttcattgagacggtcccttccatagatgcgctccactgtgac
attggcaatgcagccgagttctacaagattttccagctagagataggggaggtgtacaag
aatcccaatgcctccaaagaggaaaggaagagatggcaggctacgttggacaagcatctc
cggaagaagatgaacctgaaaccgatcatgaggatgaacggcaactttgccaggaagctc
atgacccaagagaccattgaagcagtctgtgagttaattccctctgaggagaggcatgaa
gctctgagggagctgatggacctttaccttaagatgaagccggtgtggcgatcatcgtgt
cctgccaaagagtgcccagaatctctctgccagtatagcttcaattcacagcgttttgct
gagctcctctctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacatgtccctgaaattattgagagagatggctccattggggcatgggcg
agtgagggaaatgagtctggcaacaaactgttcaggcgcttccgaaaaatgaatgccaga
cagtccaagtgctatgagatggaagacgtcttgaaacaccactggctgtatacctccaaa
tacttgcagaagtttatgaatgctcataatgcatataaaaactccgggtttaccttaagc
tcgcaggcaggcgtaggggaccccttaggcttagaggactctctggaaactcaagattca
atggaattttaa
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