KEGG   Lutra lutra (Eurasian river otter): 125080019
Entry
125080019         CDS       T08100                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03082  ATP-dependent chromatin remodeling
llv03083  Polycomb repressive complex
llv04110  Cell cycle
llv04213  Longevity regulating pathway - multiple species
llv04330  Notch signaling pathway
llv04350  TGF-beta signaling pathway
llv04613  Neutrophil extracellular trap formation
llv04919  Thyroid hormone signaling pathway
llv05016  Huntington disease
llv05031  Amphetamine addiction
llv05034  Alcoholism
llv05165  Human papillomavirus infection
llv05169  Epstein-Barr virus infection
llv05200  Pathways in cancer
llv05202  Transcriptional misregulation in cancer
llv05203  Viral carcinogenesis
llv05206  MicroRNAs in cancer
llv05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125080019
   03083 Polycomb repressive complex
    125080019
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    125080019
   04350 TGF-beta signaling pathway
    125080019
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125080019
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    125080019
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    125080019
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    125080019
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125080019
   05202 Transcriptional misregulation in cancer
    125080019
   05206 MicroRNAs in cancer
    125080019
   05203 Viral carcinogenesis
    125080019
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    125080019
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    125080019
   05165 Human papillomavirus infection
    125080019
  09164 Neurodegenerative disease
   05016 Huntington disease
    125080019
  09165 Substance dependence
   05031 Amphetamine addiction
    125080019
   05034 Alcoholism
    125080019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:llv03036]
    125080019
Enzymes [BR:llv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125080019
Chromosome and associated proteins [BR:llv03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125080019
   HDAC complexes
    Sin3A-HDAC complex
     125080019
    BRAF-HDAC complex
     125080019
    REST complex
     125080019
    SHIP complex
     125080019
    MiDAC complex
     125080019
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125080019
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125080019
  Chromatin remodeling factors
   NuRD complex
    125080019
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 125080019
NCBI-ProteinID: XP_047549754
LinkDB
Position
10:102107672..102109237
AA seq 482 aa
MAQTQRTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKYVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFRPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLSHAPGVQMQVIPEDIIPEESGDEDEEDPDKRISICSSDKRIACEKEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVIEEEKTKEEKQEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagcgcaccaggaggaaagtctgttactactacgacggagatgttgga
aactactattacggacaaggccatccaatgaagcctcatcgaatccgtatgactcacaat
ttgctacttaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgacgactacattaaattcttgcgctccatccgc
ccagataacatgtccgagtacagcaagcagatgcagagattcaacgtcggtgaggactgt
ccggtatttgatggcctgtttgagttctgtcagttatctactggtggctctgtggcgagt
gctgtgaaacttaataagcaacagacggacatcgctgtgaattgggccggaggcctgcac
catgcaaagaagtctgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctgaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tattatgctgttaactaccctctccgagatgggattgatgatgagtcctatgaggccatt
ttcaagccggtcatatctaaagtgatggagatgttccagcccagtgcggttgtcttacag
tgtggttccgactccctgtctggggatcggttaggttgcttcaatctgaccatcaaaggg
cacgccaagtatgtggagtttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggcggctacaccatccgtaacgtggcccgctgctggacgtatgaaacagcagtggccttg
gacacagagatcccgaatgagcttccatacaacgactacttcgaatactttagaccagat
ttcaaacttcacatcagtccttccaatatgaccaaccagaataccaatgaatacctggag
aagatcaaacagcgactgtttgagaacctgagaatgctgtcccatgcaccgggggtccaa
atgcaggtcattcctgaggacatcattcctgaggagagtggtgacgaggatgaagaagat
cctgacaagcgcatctcgatctgttcttctgacaaacgaattgcctgcgagaaagagttc
tcggactctgatgaggagggggaaggcggtcgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaactgaggatgaaaaagagaaagacccagaagagaagaaagaagtcata
gaagaggagaaaaccaaggaggagaagcaagaagccaaaggggtcaaggaggaggtcaag
ttggcctga

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