KEGG   Lutra lutra (Eurasian river otter): 125080046
Entry
125080046         CDS       T08100                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03420  Nucleotide excision repair
llv04120  Ubiquitin mediated proteolysis
llv05161  Hepatitis B
llv05170  Human immunodeficiency virus 1 infection
llv05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125080046
  09124 Replication and repair
   03420 Nucleotide excision repair
    125080046
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    125080046
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    125080046
   05161 Hepatitis B
    125080046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:llv04121]
    125080046
   03400 DNA repair and recombination proteins [BR:llv03400]
    125080046
Ubiquitin system [BR:llv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     125080046
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125080046
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125080046
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 125080046
NCBI-ProteinID: XP_047549804
LinkDB
Position
10:complement(104622133..104654409)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcgcagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaacacgaggttagag
atctatgtggtcactgctgagggtcttcgccccgtcaaagaggtgggcatgtatgggaag
attgcagtcatggagcttttcaggcccaagggggagagcaaggacctactgtttatcctg
acagctaaatacaatgcctgcatcctggaatataagcagagtggcgagagcattgatatc
ataacacgagcccatggcaatgtccaggaccgtattggccgcccctcagagaccggcatt
attggcatcatcgaccccgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattccactagaccgggacaataaagagctcaaggcctttaacatccgcctcgag
gagctgcatgtcatcgacgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtgaaaacctatgaggtgtctctccgtgagaag
gagttcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatc
gcagtcccagagcccttcggaggggccatcatcattggacaggagtccatcacctaccac
aatggagacaaatacctggcgattgcccctcctatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaacggttcccgctatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcaccctcaaagatctc
cgtgtggagctcctcggagagacctctattgctgagtgcttgacatacctcgataacggt
gttgtgttcgttgggtctcgccttggggactcccagcttgtgaagctgaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaaccttcaccaatttaggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcaggggcagctggttacttgctccggg
gctttcaaggaaggttccttgcgaatcatccggaatggaattggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggtctgtggccgttgcggtctgatcctaaccgggag
actgatgacactctggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaagaggtggaagaaactgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcaccagcaactcatccagatcacttcagcgtctgtaaggttggtctct
caggaacccaaagctctggtcagtgagtggaaagagcctcagggcaagaacatcagtgtg
gcctcctgcaacagcagccaggtggtcgtagcggtgggaagggccctctactacctgcag
atccatcctcaggagctccggcagatcagccatacagagatggaacatgaagtggcctgc
ttggacatcaccccactgggggacagcaatgggctgtcccctctttgtgccattggcctc
tggacagacatctcggcgcgtatcttgaagctgccctcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacttttgagagtagccac
tacctcctttgtgccttgggagatggggcgcttttctacttcgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgaccctgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtcaactacatgtgt
cccctcaattctgatggctatcctgacagcctggcactggccaacaatagcaccctcacc
atcggcaccattgacgagatccagaagctgcatatccgcacggttcccctctatgagtct
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctctccagccgtatc
gaagtccaggacacaagtggcggcacaacagccctgaggcccagtgccagcacccaggcc
ctgtccagcagcgtcagttccagcaagctgttctccagcagcacggcgccgcacgagacc
tccttcggagaggaggtggaggtgcacaacctcctcatcattgaccagcacaccttcgaa
gtgcttcatgcccaccagttcctgcagaatgagtatgccctcagcctggtctcctgcaag
ctgggcaaagaccccaacacatacttcatcgtgggcacggccatggtgtatcccgaagag
gcggagcccaagcagggtcgcatcgtggtctttcagtattccgatggaaaactacagact
gtggccgagaaggaagtgaagggagccgtgtactccatggtggaatttaatgggaagctg
ttagccagcatcaacagcacggtgcggctttatgagtggacaacagaaaaggagcttcgc
acggagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcagtgctgctgctcgcctacaagcccatggagggg
aactttgaggagatcgctcgagactttaatcctaactggatgagtgctgtggagatcttg
gatgatgataatttcctgggggccgaaaatgcctttaacttgtttgtgtgtcagaaggat
agtgctgccaccaccgatgaggagcggcaacacctccaggaggtcggtctcttccacctg
ggcgagttcgtcaatgtcttttgtcacggctctctggtcatgcagaacctgggcgagact
tccacccccacgcagggctcggtgctctttggcacagtcaacggcatgattggactggtg
acctcgctgtcagagagctggtacaacctcctgttggacatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagattgagcactccttctggagatcttttcatactgagcga
aagacagaaccagccacgggcttcatcgatggagacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggtggtggcgaacctacagtatgatgatggcagcgggatg
aagcgagaggccaccgcagatgacctgatcaaggttgtggaggagctgacgcggatccat
tag

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