Lutra lutra (Eurasian river otter): 125080071
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Entry
125080071 CDS
T08100
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125080071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125080071
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
125080071
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
Calycin_like
Motif
Other DBs
NCBI-GeneID:
125080071
NCBI-ProteinID:
XP_047549862
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Position
10:52809157..52971851
Genome browser
AA seq
1434 aa
AA seq
DB search
MAAAAAAAAAMAPPGCPGSCPNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPPDVGS
GEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLEMSVECKL
ALLKYLCECQFDDNLKFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNVRMYIEEQ
DDQDGSSWKCIVRNRNELAETLALLKAQIDPVLLKNSIQQDNSSRESPSLEDEETKKEEE
APKQEEQKENEKMKNEEQPVDSENCSTPSALEEATVKIEKEDEKELVKLPVIVKLEKPLP
ESEEKRIIKEESDSFKENVKPTKVEVKEFRADPKDIKGSMEKLEPERLEFGGNVRSSQEI
TEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPIKGPLCKSVTPTKEFLKDEIKQEEE
TCKRISTITILGHEGKQLVNGELSDEKVTPHFKTEQMETRFYDTKEDSCSPSKDRSVIVE
GNGAESLNSVLPNMKIGDLEKEVVPVEKDADSSISVLESQNQKGQLEETGPAEMEISLET
PEMAKDLSLKTALSAPESCTLKVDEKSPQSKKDKRPQVLECLEKLEKSKKTSLDKDTQRL
SPIPEEVPKHTLDSVKPVSPEAAETSAPSNMTDHCEKLASKKEVVECQSTNSAEGQPLEK
SDQEILKKDSESTKVETDHLGNAQTSGIEDPSETKSSMQKSKFKYKLVPEEETTASENTE
ITSERQKEGIKLTIRISSRKKKPDSPPQVLEPETKQEKTEKEEEKTNVGRTLRRSPRISR
PTAKVAEIRDQKADKKRGEGEDEVDEESAALQKADKKENLKKPEKDANSKVSKVKPKGKV
RWTGSRTRGRWKYSSNDESEGSDSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHP
ELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVALKKKER
AERRKERLVYVGISIENIIPPQEPDFSEDHEEKKKDSKKSKANLLERRSTRTRKCISYRF
DEFDEAIDEAIEDDIKEADGGGAGRGKDISTITGHRGKDISTILDEERKENKRPQRAAAA
RRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEDPPSNDDSDTDF
CSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDFVETR
RRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDEL
AKESKRSVRKRGRSTDEYSEADEEEGKPSRKRLHRIETDEEESCDNAHGDADQPAHDSQP
RVLPAEQESTKKPYRIDSDEEEDFENVGKVGSPLDYSLVDLPSANGQSPGKAIENLIGKP
AEKPQTPKDNSTASASLAPNGTNGGQEAGAPEEEEDELLRVTDLVDYVCNSEQL
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcagcagcggcggcggcgatggctcctccgggctgcccgggttcgtgc
cccaacttcgccgttgtctgctctttcctggagcgctacgggccgctgctcgacctgcct
gagttgccgtttcccgagctagagcgagtgctgcaggcgccgccgccggacgtcggcagt
ggagaagtaccaaaagaattggtggagctccatttgaagttaatgaggaagattggcaaa
tctgttacagcagacagatgggaaaaatatttgatcaagatatgccaagagtttaatagc
acctgggcatgggagatggagaagaagggctatcttgaaatgagtgttgaatgcaaacta
gcactcctaaagtacctctgcgagtgtcagtttgatgacaatctcaaattcaagaacatt
atcaatgaggaggatgctgataccatgcgtctccaaccaattggccgagacaaagatggc
ctcatgtactggtaccagttggaccaagatcataatgtcagaatgtacatagaagaacag
gatgatcaagatggctcttcatggaaatgcattgtcagaaatcgaaacgaattggctgag
actcttgccctcctgaaagcacagattgatcctgtgctactgaaaaactctatccaacag
gacaactcttcccgggaaagtcccagcttagaggatgaggagactaaaaaggaggaagaa
gcacctaaacaagaggaacagaaggaaaatgaaaagatgaaaaatgaagagcagccagta
gattcagaaaactgttctacacccagtgctctagaagaggctactgtgaaaatagaaaaa
gaagatgaaaaggaacttgtcaaactgccggtcatagtcaagctagaaaaacctttgcca
gaaagtgaggaaaaaaggattatcaaagaagaaagtgattccttcaaggaaaatgtcaaa
cccactaaagttgaagtaaaggaatttagagcagatcctaaagatatcaaaggtagcatg
gagaaactagagccagagaggctagagtttggtggcaatgttaggtcttctcaagaaatc
actgagaagtctactgaagaaaccgagaaacttaaaaatgaccagcaggctaagatacca
ctgaaaaaacgagaaattaaactgagtgatgattttgacagtccaatcaaaggacctttg
tgtaaatcagttactccaacgaaagagtttttgaaagatgaaataaaacaagaggaagag
acttgtaaaaggatctctacaatcactattttgggtcatgaagggaaacaactggtaaat
ggagaacttagtgatgaaaaggtaactccacattttaagacagaacaaatggagacaaga
ttttatgatacaaaagaagatagctgtagcccctctaaagacagaagtgtcattgttgag
ggaaatggagcagagtccttaaattctgtcctaccaaatatgaaaataggtgatcttgag
aaggaggtggtccctgtagagaaagatgcagacagttcaatatcagtcttagaatcccaa
aatcaaaaagggcaattggaggaaactggtcctgcggaaatggaaatctctcttgagact
cctgagatggccaaggatctctctttgaaaactgcattatctgctcctgaatcttgtact
ctgaaagttgacgagaagtctccccaaagtaaaaaggataagcgcccacaagttctagaa
tgtcttgaaaagttagagaagtccaaaaagacttctcttgataaggacacacaaagattg
agtccaataccagaggaagttccaaagcatactctagactcagtaaagccagtctctcct
gaggcagctgaaacttcggcaccatctaacatgactgaccactgtgagaagttagcctcc
aaaaaggaagtggtggaatgtcagagcacaaattctgctgaaggtcagcccctagaaaaa
tcagaccaagaaattctaaaaaaagattctgaatccaccaaggtagaaacagatcatctg
ggcaatgcccagacctcaggcatagaggatccttctgagacaaagagttctatgcaaaaa
agcaaatttaaatataagctggttcctgaagaagaaaccactgcctcagaaaacacagag
ataacctctgaaaggcagaaagagggcatcaaattaacaattaggatatccagtaggaag
aagaagccagattcccctccccaagttctagaaccagaaaccaagcaagagaagacagaa
aaggaagaagagaaaacaaatgtaggtcgtactttaaggaggtctccaagaatatctaga
cccacagcaaaagtggctgagatcagagaccagaaagctgataaaaaaagaggggaagga
gaagatgaagtggatgaagagtcagcagctttgcagaaagcagacaaaaaagaaaactta
aaaaaaccggagaaggatgcgaattctaaagtaagcaaggtaaaacccaaaggcaaagtt
cgatggactggttctcgaacacgtggcaggtggaaatactctagcaatgatgaaagtgaa
gggtcagacagtgaaaaatcatctgcagcttcagaggaagaggaagaaaaggaaagcgaa
gaagccatcctagctgatgatgatgaaccatgcaaaaaatgtggccttccaaaccatcct
gagctaattcttctgtgtgactcttgtgacagtgggtaccacactgcctgccttcgccct
cctctgatgatcatcccagatggagaatggttctgccccccttgccaacacaaactactg
tgtgagaaattagaagaacaattgcaggatttggatgttgccttaaagaagaaggaacgt
gctgaacgcaggaaagaacgtttggtgtatgtgggtatcagtattgaaaacatcattcct
ccacaagagccagatttttctgaagatcatgaagaaaagaaaaaagattcaaaaaaatcc
aaagcaaacttacttgaaaggagatcaacaagaacacgcaaatgtataagttacagattt
gatgaatttgatgaagcaatcgatgaagctatagaagatgatatcaaagaagctgatgga
ggaggagctggccgaggaaaagatatctccaccatcacaggtcaccgtgggaaagacatc
tctactattttggatgaagaaagaaaagaaaataaacgaccccagagggcagctgctgca
cgccggaagaaacgccggcgcctaaatgatctggacagtgacagcaacctggatgaagaa
gagagtgaggatgaattcaagatcagcgatggatctcaagatgagtttgttgtatctgat
gaaaacccagatgaaagtgaagaagacccaccatctaatgatgacagcgacactgacttc
tgtagccggagactgaggcgacatccctcccggccaatgaggcaaagcaggcgtttgcga
agaaagaccccaaagaaaaagtactctgatgatgatgaagaggaggagtctgaggagaac
agtagagactctgaaagtgattttagcgatgattttagtgatgattttgtagaaactcgg
cggaggcggtcaaggaggaaccagaaaagacaaattaactacaaagaagattctgaaagt
gatggttcccagaagagtttacgacgtgggaaagaaatcagacgagttcacaagcgtagg
ctttccagctcagagagtgaagagagctatatgtccaagaactctgaagatgatgagcta
gctaaagaatcaaagcggtcagttcgcaagcgaggtcgaagcacagatgagtattcagaa
gcagatgaggaagaaggaaaaccatctcgaaaacggctacaccggattgagacagacgag
gaggagagttgtgacaatgctcatggagatgcagatcagcctgcccatgacagccagccc
agggtcctgcccgcagaacaggagagcaccaagaagccctatcggatagacagcgatgag
gaagaggactttgaaaatgtaggcaaggtggggagccctttggactatagcttagtggac
ttgccttccgccaatggacagagtcctggcaaagccattgagaacttgattggcaagcca
gctgagaagcctcagacccccaaggacaacagcacagccagtgcgagcctggcccccaat
gggacaaatggtgggcaggaggcaggggcaccagaagaagaggaagatgagcttttaaga
gtgactgaccttgttgattatgtctgtaacagtgaacagttataa
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integrated database retrieval system
